Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03416 ATGCAGATAAGGAGATCGTCATATCATGATGTTGTGAGGGTGGCTGAGATTCAGAAGGTATTGGATATAAGTGGAGTTCAAACGTATGTGATTAATAGTGCTAGAGTCCTTTTTCTTAATGAGAGGCCACAAAATCAAGTTAAGACGAATAATGGTGTTATTAGTGGGAGTAAAACCAATCCCCATTTGTGTGAAATATGCAAAAGAAATCTCTTGGACCCTTTTCGTTTCTGTTCTTTGGGTTGCAAGCTTGTAGGAATAAAGAAAAATGGGAATGCGAGCTTTATCTTAAGCGCAAAGAAAGACGAGGAAATAGGAAAAATAGAGGAAGGAAGGGGAAGATTAAGGTTGGTATCAAAGGAAGAATTAATAATGCGTGAAGGAATCCACAAACAATTATACCAAAGCACGTCTTCTCCTTATTGTCCTCGTTCATCTCAACAAGCTTGTTCAAATTCAAGGAGAAGAAAGGGAATACCTCATAGGGCACCTTTAGGACCCTAA 504 0.3849 MQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQNQVKTNNGVISGSKTNPHLCEICKRNLLDPFRFCSLGCKLVGIKKNGNASFILSAKKDEEIGKIEEGRGRLRLVSKEELIMREGIHKQLYQSTSSPYCPRSSQQACSNSRRRKGIPHRAPLGP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03416 167 MobiDBLite consensus disorder prediction 136 167 - -
Car06g03416 167 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 165 - -
Car06g03416 167 MobiDBLite consensus disorder prediction 136 154 - -
Car06g03416 167 Pfam PLATZ transcription factor 4 84 IPR006734 -
Car06g03416 167 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03416 Car-Chr6 64163042 64165737 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car06g03416 PLATZ 3.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03416 - - aprc:113859745 251.521