Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g03412 | ATGGCGAAAGGTACTGATTCTGAGAAATACGTGGTGCTGTCTAAGGTACGTGCGGGTCTGAAGAGAGAGTTTTCCTTTGCTATCAAGGCTCACTCTGAGGTATGTGGTGGTTCACTCAGTCGAACCCGGTCTAATATGAACCGGAATGTGGTTCAGGTTTCTGAACCTTCTCAAAACAAGAGGTTCAGAAATTCCGGTCCAGTGGAGAAGGATGATATTCTGAGTGAAGGAAATGATGGTTTTGTTGCTGGTGAAATTGAAATTGGTGATGATGCTAAGAAGGAAATTGTGTCTGATAATGTAAGAAGTGTGATTACACCAATTCAAGTGAAAAAGTGGAAGGCGAAATTTTCGAGCTCTAAGAAGTTCCCTTCGAAGCTGAAGGATCTTTTAGATTCGAGGATTCTCGATGGATTACACGTGAAATATGTCCGCGGAGTCAGGGTGCGAAAGCTTGATGATGCAGAGTTTTGGGGAGTGATTAAAGGCGATGGGATTGTATGCTATTGTGAAATTTGTGATGGGGTCAAGACTGTGAGCCCTGCCACATTTGAGCTTCATGCTGGTAGTTCAAACAAACGCCCCCCAGAGTATATTTTCCTTGAGAATGGGAATTCTATCCGTGTTGTCATGAATACATTTTTGAATAATCCTTTAGAAAATCTGGAGGAAGCTGTCCATGAGGTCCTTGGAGACTTTACTATGAAGAAATCTAAATTCTGTTTGAACTGTAGAGATGTTAATGTTGTGTCAAGACTGTTCTGCAATTTTTGTGTGGGATCGGAGGACTGTCAACCTAGTCCCACTCATACAACTGAGACTAGCAATAGTTGTGTTTCACTAGAAGTTAAACCCAGATCCCCAAAACCAGTTGTGCTTCCAAAGTCATTGCCCCAGGGGCCCAAGGAACCCAAGGGAATGAAGTTCAACACATCTCGTGATAAGAATCAGGGAAGATTAACTAAGAAGGATCTACGCTTTCATAAGTTGATCATTCAAGATGTGTTGAAAGAAGGAACTGAAGTAGCATACATTGCTTATGGAGAGAAATTGCTGGACGGATACGTAAAGAGATCTGGAATATTTTGTTTCTGTTGTGAGGCTGTGGTCAGTCCTTCTCAGTTTGAAGCACATGCTGGTTGGGGATCACGACGGAAGCCATACGTGAGCATATTCACCAAAGATGGAGTCTCACTACATACGTTGGCCATCTCTCTGTTGAAACAACAGGGAATCTCTACGACTTATAATGATGACCTCTGCAGTATTTGTAAACAAGGAGGGAATCTGTTATGTTGTGATGGATGCCCAAGAACTTTTCACACAGAATGTGTTCCTCTTCTTTGCATACCGAGTAGTTTCTGGTACTGTAGATATTGTCAAAATATAATGCGGAAGGGGAGATATGTTGAGCATAATGCAAATGCTCTGGCAGCTGGAAGGATTGCAGGGGTTGATTTGGAACAGATAACCCAGAGATTCATCCGTATTGTAAAAGCTACAGAAGATGACGAAAGTGGATGTGCACTATGCAGAGAGAAAGATTTCACCAGAGAGTTTGGTCCTCGGACAGTAATTATTTGCGACCAGTGTGAGAAGGAATATCACATAGGGTGTTTGAAGGATCATAACATGCAGAACATAGAGAAATTACCTGAAGGGAATTGGTACTGCTGCTCAGATTGTGATCAAATTCATACTGCTCTGCAAAATTTAGTGGCTTGTGGGGAGGAGCATCTTTCAGATTCCCTCCTAAGTTTGATTAAAAAGAAGCATGAAAAAAAAGGTTTAGAAACTGAATCGGGGCTTGATATAAAATGGAGGGTTCTGAATTGGAAGATGATTGCTTCTGAAGAGATTAGGCCATTGCTTTCACAGGCTGTTGCTATTTTTCACGAGCAATTTGATCCCATAGTTGATTCTGATACAGGCAATGATTTCATTCCGACGATGATTTTTGGGAGGACAATCAAGGATCAAGATTTTGCCGGAATGTACTGTGCAGTGCTCACTGTCAACCAAGTGGTTGTATGTGCGGGGATATTCCGTGTGTTTGGGCAAGAAGTAGCAGAGCTTCCCTTAGTGGCAACTAATACCAATTGCCAAGGACAGGGTTACTTCCAGTCCCTACTTTCTTGCATTGAGAGGGTGCTTGGATCATTAAAAGTGAGACGATTAGTCCTACCAGCTGCTCATCAAGCTGAATCAATATGGACCGGTAAATTCGGGTTTACTAAGGTAGACAGAGATGAGATAGATAATTATATGAGATGTTACCGAATGATGGTATTCCAAGGGACCTCGTTATTACAGAAGCCGGTTCCTGCCCTCTAA | 2334 | 0.4225 | MAKGTDSEKYVVLSKVRAGLKREFSFAIKAHSEVCGGSLSRTRSNMNRNVVQVSEPSQNKRFRNSGPVEKDDILSEGNDGFVAGEIEIGDDAKKEIVSDNVRSVITPIQVKKWKAKFSSSKKFPSKLKDLLDSRILDGLHVKYVRGVRVRKLDDAEFWGVIKGDGIVCYCEICDGVKTVSPATFELHAGSSNKRPPEYIFLENGNSIRVVMNTFLNNPLENLEEAVHEVLGDFTMKKSKFCLNCRDVNVVSRLFCNFCVGSEDCQPSPTHTTETSNSCVSLEVKPRSPKPVVLPKSLPQGPKEPKGMKFNTSRDKNQGRLTKKDLRFHKLIIQDVLKEGTEVAYIAYGEKLLDGYVKRSGIFCFCCEAVVSPSQFEAHAGWGSRRKPYVSIFTKDGVSLHTLAISLLKQQGISTTYNDDLCSICKQGGNLLCCDGCPRTFHTECVPLLCIPSSFWYCRYCQNIMRKGRYVEHNANALAAGRIAGVDLEQITQRFIRIVKATEDDESGCALCREKDFTREFGPRTVIICDQCEKEYHIGCLKDHNMQNIEKLPEGNWYCCSDCDQIHTALQNLVACGEEHLSDSLLSLIKKKHEKKGLETESGLDIKWRVLNWKMIASEEIRPLLSQAVAIFHEQFDPIVDSDTGNDFIPTMIFGRTIKDQDFAGMYCAVLTVNQVVVCAGIFRVFGQEVAELPLVATNTNCQGQGYFQSLLSCIERVLGSLKVRRLVLPAAHQAESIWTGKFGFTKVDRDEIDNYMRCYRMMVFQGTSLLQKPVPAL | 777 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g03412 | 777 | Pfam | Tify domain binding domain | 354 | 403 | IPR032308 | - | |
| Car06g03412 | 777 | Pfam | Tify domain binding domain | 159 | 212 | IPR032308 | - | |
| Car06g03412 | 777 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 620 | 761 | IPR016181 | - | |
| Car06g03412 | 777 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 488 | 574 | IPR013083 | - | |
| Car06g03412 | 777 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 413 | 478 | IPR013083 | - | |
| Car06g03412 | 777 | ProSiteProfiles | Zinc finger PHD-type profile. | 418 | 463 | IPR019787 | - | |
| Car06g03412 | 777 | PANTHER | ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 87 | 271 | - | - | |
| Car06g03412 | 777 | PANTHER | ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN | 274 | 776 | - | - | |
| Car06g03412 | 777 | SUPERFAMILY | FYVE/PHD zinc finger | 500 | 560 | IPR011011 | - | |
| Car06g03412 | 777 | ProSitePatterns | Zinc finger PHD-type signature. | 421 | 460 | IPR019786 | - | |
| Car06g03412 | 777 | SUPERFAMILY | FYVE/PHD zinc finger | 401 | 464 | IPR011011 | - | |
| Car06g03412 | 777 | PANTHER | AUTOIMMUNE REGULATOR | 274 | 776 | - | - | |
| Car06g03412 | 777 | PANTHER | AUTOIMMUNE REGULATOR | 87 | 271 | - | - | |
| Car06g03412 | 777 | MobiDBLite | consensus disorder prediction | 290 | 315 | - | - | |
| Car06g03412 | 777 | ProSiteProfiles | Zinc finger PHD-type profile. | 505 | 565 | IPR019787 | - | |
| Car06g03412 | 777 | CDD | PHD1_AIRE | 420 | 460 | - | - | |
| Car06g03412 | 777 | Gene3D | - | 604 | 772 | - | - | |
| Car06g03412 | 777 | ProSitePatterns | Zinc finger PHD-type signature. | 508 | 562 | IPR019786 | - | |
| Car06g03412 | 777 | SMART | PHD_3 | 507 | 563 | IPR001965 | - | |
| Car06g03412 | 777 | SMART | PHD_3 | 420 | 461 | IPR001965 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g03412 | Car-Chr6 | 63987525 | 63995584 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car06g03412 | 124 | 774 | PHD Transcription Factor Family | AT2G36720 | 42.758 | 0.0 | 560 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g03412 | - | - | lang:109351691 | 889.026 |