Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03408 ATGGAAAGAAAACCGTTCAACAATAATGATTATAGTTCAGAGGACGAAGGAACTGAACACTACAGGCGTGGAGGGTACCATGCTGTTCGAGTTGGCGATACTTTCAACAATGGTTGTTATGTTGTACAGTCTAAGCTCGGTTGGGGCCATTTTTCAACTGTTTGGCTCGCTTGGGACACTCTCAAATCGCGCTATGTGGCCCTTAAAATTCAAAAGAGCGCGCAGCACTACACTGAAGCTGCAATGGACGAAATAAAGATTCTCAAACAAATTGCAGAGGGAGACCCTGATGACAAGAAATGTGTTGTGAAGCTTTTGGATCACTTTAAGCATTCAGGGCCTAATGGTTTGCATGTGTGTATGGTTTTTGAATTCCTCGGCGATAATCTTCTCACCCTTATCAAATATAGCGACTTTCGGGGGGTTCCTCTCTCCATGGTTAAACAAATATGTTTTCATATTTTGATGGGCTTGAATTATTTGCACCACGAGCTTTCTGTCATACACACTGATTTGAAGCCAGAGAATGTGTTGCTTCTTTCATCGATTGATCCATGTAAGGATCCAAGGAAATCAGGCACTCCACTTATCCTTCCAAACACCAAGGATAAGGCCGTGTCTAATAACAGCACAATCCAAAACAATAAAATTGGGAGTGGTGATTTGATGAAGAACCAGAAGAAAATGCAAGGAAAGGCTAAGAGGGTGGCTCAAGGCTGTGTTGAGAAGGCAAATCCCGAGGATTGTCAAGAACCCGATGAGCAAGAAGATTGTAATAACGGTGTGAAATCAAGTGTAGAATCTGTTGAAAACAAACCAAATAGTTCTTTGAGTGAAGGTGAATCAATACAAACTTTTGAAAAGGATGTTTCACAAGGAAATCATGGTCATAGGAGAGGTAGCCGTTCCATGAGAAAGAAGCTGCTGGCAGCTGTTGATCTTAAGTGCAAGCTGGTTGATTTTGGCAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATATTCGACTCCAGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGTTACCGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCATCTAGCATTGATGATGGAACTTCTTGGAATGATGCCTAGCAAGATTGCACTAGGTGGTCGTTATTCTCGAGAATTTTTCAACAGGCATGGCGACTTGAGACACATCCGCGAATTGCGATTCTGGCCAATTAATAAGATTCTGATGGAGAAGTATAATTTCAGTGAACAAGATGCAAATGACATGGCTGACTTCCTCATTCCAATACTCGATTTTGCCCCCGAAAAAAGACCAACAGCTGCTCAGTGCCTTAGTCATCCGTGGATCAGCGGAGGTCCCCGAACTCTTGAACCCTCAGTGACTAGGATGCAACCTGATGCAATCAATGAGGAATTGTTTGAAAAGAGAAAGAAGGAAAAGGAAAAGGCTGAGCAGGAGTTAGTGGAAGTTGGTATGAGGAATATAGCCATTAATGGAACTAGTGAATCCCTCAAAGACTCTCAACCTCTAAAGTCATAA 1620 0.4204 MERKPFNNNDYSSEDEGTEHYRRGGYHAVRVGDTFNNGCYVVQSKLGWGHFSTVWLAWDTLKSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGLHVCMVFEFLGDNLLTLIKYSDFRGVPLSMVKQICFHILMGLNYLHHELSVIHTDLKPENVLLLSSIDPCKDPRKSGTPLILPNTKDKAVSNNSTIQNNKIGSGDLMKNQKKMQGKAKRVAQGCVEKANPEDCQEPDEQEDCNNGVKSSVESVENKPNSSLSEGESIQTFEKDVSQGNHGHRRGSRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADMWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPSKIALGGRYSREFFNRHGDLRHIRELRFWPINKILMEKYNFSEQDANDMADFLIPILDFAPEKRPTAAQCLSHPWISGGPRTLEPSVTRMQPDAINEELFEKRKKEKEKAEQELVEVGMRNIAINGTSESLKDSQPLKS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03408 539 ProSiteProfiles Protein kinase domain profile. 40 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03408 539 SUPERFAMILY Protein kinase-like (PK-like) 35 488 IPR011009 -
Car06g03408 539 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 536 - -
Car06g03408 539 Gene3D Transferase(Phosphotransferase) domain 1 311 476 - -
Car06g03408 539 Coils Coil 496 516 - -
Car06g03408 539 CDD STKc_SRPK 29 476 - -
Car06g03408 539 Pfam Protein kinase domain 40 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03408 539 Pfam Protein kinase domain 313 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03408 539 SMART serkin_6 40 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03408 539 Gene3D Phosphorylase Kinase; domain 1 26 125 - -
Car06g03408 539 MobiDBLite consensus disorder prediction 259 282 - -
Car06g03408 539 PANTHER SERINE KINASE-LIKE PROTEIN 8 536 - -
Car06g03408 539 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Car06g03408 539 Gene3D Transferase(Phosphotransferase) domain 1 94 194 - -
Car06g03408 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Car06g03408 539 MobiDBLite consensus disorder prediction 244 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03408 Car-Chr6 63939707 63944553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03408 7 527 EF-hand Containing Proteins AT5G22840 67.366 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Car06g03408 Pkinase 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03408 K08832 - gmx:100790060 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02189 01 47649018 47652152 Car06g03408 06 63939707 63944553 PCT