Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03397 ATGGAAGCACCAATGGAATTTTGGGGTATTGAGGTTAAGCCAGGACAATCTGTCAACGTTGATCCAAATGATGAATTAGAGGGATACATCCACATATCTCAGGTTGCACTTGGAGAAATAAAGAAAGACAAATCAATTGAACCTGTTGTTCTGTATTTGAAAGTTGCTGATCAAAAGCTTGTCTTGGGAACTCTTATTAAGGATTCAATTCCCCATCTTGCTTTGGATATAGTTCTAGACAAGGAATCTGAACTTTCCCACAATTCCAAAACTGCTAGCATCTATTTTTCTGGATACAAAGTTCTTCATGGTGATGATGGTGATGACTCTGATTTTTCTGATTCTGATTGTGATCATGATCATGAAATTCCAGTGATTGACCAAGCTCAAGTTGCAAAGGAGGTGGCTAAACTTGGAAAAACTGCTGCTAAACCTGCTGCTGCAAACGGTGCATCTGCTAAGCAAGTCAAGATTGTTGATCCAGAGAAAgatgaagttgaatctgatgatgatgactccgatgaagatttttctgaagatgatgatactgatgcttctgatgaGGTGGATACTATTGCtgatagtgatagtgatgagggcagtgagagtgatGAGGAGACTCCTGCCAAGAAGATGgataccgatacagatagtgatgaggacagtgagagtgaCGAAGAAACTCCAGCTAAGGAGGTGACTGTGATCAATAAGAACAAGAGACCCAACGGGTCTGCATCAAAAACCCCAGTTCCTACCAAGAAAGCTAAAAATGCTACTCCTGAAAAGACTGATGGTAAGAAAGGTGCACATACTGCAACTCCCCACCCTATGAAGAAAGGTGGAAAATCCCCAAAGGGTTCTGCTGGGAAGGGCCAGACTCCCAATTCTAACAAGTCTGGCAACTTCAAAGGTGGTAAACAGCAAAAAAGGACTAAGTAA 942 0.3524 MEAPMEFWGIEVKPGQSVNVDPNDELEGYIHISQVALGEIKKDKSIEPVVLYLKVADQKLVLGTLIKDSIPHLALDIVLDKESELSHNSKTASIYFSGYKVLHGDDGDDSDFSDSDCDHDHEIPVIDQAQVAKEVAKLGKTAAKPAAANGASAKQVKIVDPEKDEVESDDDDSDEDFSEDDDTDASDEVDTIADSDSDEGSESDEETPAKKMDTDTDSDEDSESDEETPAKEVTVINKNKRPNGSASKTPVPTKKAKNATPEKTDGKKGAHTATPHPMKKGGKSPKGSAGKGQTPNSNKSGNFKGGKQQKRTK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03397 313 Pfam Nucleoplasmin-like domain 7 100 IPR041232 -
Car06g03397 313 MobiDBLite consensus disorder prediction 258 272 - -
Car06g03397 313 MobiDBLite consensus disorder prediction 289 305 - -
Car06g03397 313 MobiDBLite consensus disorder prediction 238 254 - -
Car06g03397 313 Gene3D Nucleoplasmin core domain 2 105 - -
Car06g03397 313 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 5 304 - -
Car06g03397 313 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 5 304 - -
Car06g03397 313 MobiDBLite consensus disorder prediction 164 203 - -
Car06g03397 313 MobiDBLite consensus disorder prediction 143 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03397 Car-Chr6 63597259 63600956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03397 5 312 C2H2 Transcription Factor Family AT5G03740 38.170 1.54e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03397 - - cam:101503096 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02200 01 47765916 47769016 Car06g03397 06 63597259 63600956 PCT