Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03386 ATGGCGACGGAAAACAGCGTAACTCAAAACCCTAGCCATGGAAAACGACCAAAGGTGTTAGTTATAACGGGCCCCACAGGTTCTGGTAAATCAAAGCTAGCCGTTGATTTAGCCTCCCACTTCTCCATCGAAGTCATCAACGCTGATTCCATGCAAGTCTACCGTGGCCTCGATATTCTCACCAACAAACTCCCCTTCTCTGAACAAAACGGAGTGCCGCACCATCTCTTGGGTACTGTAAACCCTAACTTTGAATTCACAGCCAAAACTTTTCGTGATTCTGCTATTCCCATTATTGATGACATATTGTCTCGTAAACACTTACCTGTTATAGTTGGTGGTACTAATTACTATATACAGGCTCTGGTGAGTCCGTTTCTTCTAGACGATTCAACAGACAATTTGGATGAAAACTATTTGGCTGATTCACCTGGTATCACAGGGCATGATGATGATTTTGTTGCTGAAGTTGACAGTTCAAGCTACAGTTATGATTTGCTTAAAGATATTGATCCGGTTGCAGCAAATAGAATCCATCCAAATAATCATAGAAAGATAAATCAATACATTAGTTTGTACTCTCGAACTGGTGCTCTTCCCAGTAAGGTTTTTCAAGGACAGGCAGCAGAGAAGTGGGGTCAAGCTGATAACTTAAGATATGATTGTTGTTTTATATGTGTGGACGCATCTCTCCCTGTACTAGACAGATATGTAGAGCAGCGGGTAGATGACATGATGGATGCAGGGTTACTCAATGAAGTCTATGACATTTACACTATGAATGCAGATTATACCAGAGGTTTGCGACAGGCCATTGGTGTTCGTGAGTTTGAGCATCTTCTTAGAACTTGTGTTATCAAAAACATAAATCAAAGAGAGGATGGATCAACCGAGGGATCAAGCTTAGAAAATGGTGAGCCATTGTTTTATGGCAATTTGATGGAGTGGTTGAGATCTTCCTCTGACACTGAATCAACAATTCATTTGGAAGAAGCAATTGAGAAAGTAAAGGTTAATACCAGGAGACTTGTCCGCCGTCAGAAGAGGATGCTCAGTCGACTGCAAACACTGTTTAGTTGGGATATACGCTATGTTGATTCCACGGAGTCAATATTGAGCAAATCAAATGATGTATGGAATAGCCAAGTGGTTGAATCTGCCAAGAAGATAGTTACATCTTTCCTGAGTGAGGATGGAAGCTTGTCGTCGACCATTGGGATGTCAAATAGCAGTGGGACGAAAATAATCCACAGGGACCTCTGGACTCAATACACATGCAAGGCATGCGGTGATCGGGTTCTTAGAGGATTACATGAATGGGAACAACACATACATGGTCGTGGCCACCGTAAGCGTATTTCTAGTCTCAAGAGCAAGGCACGAGGTCTTAGTTTTGTGGAACAGAAACATGAGCCTTCTGAGCGCGAGTGCATGGATATATTGTAG 1446 0.4239 MATENSVTQNPSHGKRPKVLVITGPTGSGKSKLAVDLASHFSIEVINADSMQVYRGLDILTNKLPFSEQNGVPHHLLGTVNPNFEFTAKTFRDSAIPIIDDILSRKHLPVIVGGTNYYIQALVSPFLLDDSTDNLDENYLADSPGITGHDDDFVAEVDSSSYSYDLLKDIDPVAANRIHPNNHRKINQYISLYSRTGALPSKVFQGQAAEKWGQADNLRYDCCFICVDASLPVLDRYVEQRVDDMMDAGLLNEVYDIYTMNADYTRGLRQAIGVREFEHLLRTCVIKNINQREDGSTEGSSLENGEPLFYGNLMEWLRSSSDTESTIHLEEAIEKVKVNTRRLVRRQKRMLSRLQTLFSWDIRYVDSTESILSKSNDVWNSQVVESAKKIVTSFLSEDGSLSSTIGMSNSSGTKIIHRDLWTQYTCKACGDRVLRGLHEWEQHIHGRGHRKRISSLKSKARGLSFVEQKHEPSERECMDIL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03386 481 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 15 398 - -
Car06g03386 481 Gene3D - 17 418 IPR027417 -
Car06g03386 481 MobiDBLite consensus disorder prediction 1 21 - -
Car06g03386 481 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 15 398 IPR039657 -
Car06g03386 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 260 IPR027417 -
Car06g03386 481 Gene3D - 150 208 - -
Car06g03386 481 Pfam IPP transferase 52 349 - -
Car06g03386 481 Gene3D Classic Zinc Finger 419 463 - -
Car06g03386 481 TIGRFAM miaA: tRNA dimethylallyltransferase 19 285 IPR018022 GO:0008033
Car06g03386 481 Hamap tRNA dimethylallyltransferase [miaA]. 19 373 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03386 Car-Chr6 63372418 63376364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03386 22 458 C2H2 Transcription Factor Family AT2G27760 57.143 2.85e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03386 K00791 - gmx:100792690 713.375