Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03384 ATGACGACACTGTACAGTGAGGGAATGAACATTACAAATTTACGGTTTTGCCACTGTTCCAAACTCCTCACTTCAAACCCAAATATCCCATTCCTCATTCCTTCAACGCACATAAAAAAGTTAACTCCAAAACCTTATTCAATTTCCTTCAAAAGTAATCACTTTTCTCCAATTCGAGCTTCTATGGCTTCATCCACTGTTACAGAAAAACCATTCTCCGTTCTCTTCGTGTGTCTTGGCAACATCTGTAGAAGCCCAGCGGCTGAAGGGGTTTTCACAGACTTGGTTCAAAAAAGGGGTATTCATTCTAACTTCAGAATCGACTCTGCTGGTACAATCAATTATCATGAAGGTAATGAAGCTGACCCTAGAATGAGGGCTGCCTCAAAAAGACGTGGGATTCAGATAACTTCACTTTCAAGGCCAATTAGGTCTTCTGATTTTGTTGAGTTTGATCTTATTCTTGCCATGGACAAGCAGAATAAAGAGGACATATTGGAGGCTTTCAATAGATGGAGATTTAGAGAGACTTTACCTGAAGATGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTACGAAGCACAATGAAACTGAAGTCCCGGATCCTTACTATGGCGGACCTCAAGGTTTTGAGAAGGTGTTAGATCTGCTTGAAGATGCTTGTGAATCATTGCTGGCAAACATTTTGGCAGAAAACAAAGATATACAAGAATCCTAA 723 0.3983 MTTLYSEGMNITNLRFCHCSKLLTSNPNIPFLIPSTHIKKLTPKPYSISFKSNHFSPIRASMASSTVTEKPFSVLFVCLGNICRSPAAEGVFTDLVQKRGIHSNFRIDSAGTINYHEGNEADPRMRAASKRRGIQITSLSRPIRSSDFVEFDLILAMDKQNKEDILEAFNRWRFRETLPEDAHKKVKLMCSYCTKHNETEVPDPYYGGPQGFEKVLDLLEDACESLLANILAENKDIQES 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03384 240 SMART LMWPc_2 72 229 IPR023485 -
Car06g03384 240 PRINTS LMW phosphotyrosine protein phosphatase signature 74 91 IPR017867 GO:0004725|GO:0006470
Car06g03384 240 PRINTS LMW phosphotyrosine protein phosphatase signature 117 133 IPR017867 GO:0004725|GO:0006470
Car06g03384 240 PRINTS LMW phosphotyrosine protein phosphatase signature 201 216 IPR017867 GO:0004725|GO:0006470
Car06g03384 240 Pfam Low molecular weight phosphotyrosine protein phosphatase 74 227 IPR023485 -
Car06g03384 240 Gene3D - 68 239 - -
Car06g03384 240 SUPERFAMILY Phosphotyrosine protein phosphatases I 70 230 IPR036196 -
Car06g03384 240 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 10 235 - -
Car06g03384 240 CDD LMWPTP 73 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03384 23 234 Protein tyrosine phosphatase (PTP) family AT3G44620 57.255 5.21e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03384 K25307 - gmx:100797254 346.665