Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03376 ATGTATAGCAATTTCAAGGAACAAGCAATAGAGTACGTCAAACAAGCCGTACAAGAAGACAATTCGGGTAACTACGCAAAAGCGTTCCCTCTATACATGAACGCGTTAGAGTATTTCAAAACGCATCTCAAGTACGAAAAGAATCCCAAAATCAAAGAAGCAATCACTCAGAAATTCACAGAGTATCTTCGCCGTGCAGAGGAGATCCGTGCTGTTTTAGATGATGGTGGGCCGGGGCCTGCTTCTAATGGGGATGCTGCTGTTGCTACGCGGCCCAAAACGAAGCCCAAGAACGGTGGTGAGGGAGATGGCGAGGATCCTGAGCAGTCTAAGCTTAGGGCTGGCTTGAATTCTGCGATTGTGAGGGAGAAGCCGAATGTGAAGTGGAATGACGTTGCTGGGTTGGAGAGTGCGAAACAGTCTTTGCAGGAAGCGGTTATCTTGCCTGTGAAGTTTCCTCAGTTCTTCACTGGTAAAAGACGACCTTGGAGGGCATTTTTGTTGTACGGACCACCTGGAACAGGAAAATCATACTTGGCCAAGGCTGTTGCAACGGAAGCTGATTCTACATTTTTCAGTGTGTCTTCATCAGACCTTGTTTCAAAGTGGATGGGTGAAAGTGAAAAGCTGGTTTCAAATCTTTTCGAAATGGCTCGCGAAAGTGAACCTTCTATCATATTTGTTGATGAAATAGATTCTCTATGTGGTCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATTAAAACTGAACTTCTGGTGCAGATGCAGGGTGTCGGACACAATGATCAGAAAGTTCTCGTTCTTGCAGCAACAAATACACCTTATGCTCTTGACCAGGCAATAAGGCGGCGTTTTGATAAGCGTATATATATTCCACTGCCAGATTTAAAGGCTCGCCAACACATGTTCAAGGCAAGGGAAATATTCACGATTATGTTTATTCACTTTATTGAAGGGTGGGTGCATCTAGGAGATACTCCCCATAACTTGACTGAAAGTGATTTTGAACACTTGGCTCGCAAGTCAGAGGGGTTTTCAGGTTCAGATGTATCTGTCTGCGTGAAGGATGTTTTATTTGAACCTGTTCGTAAAACCCAAGATGCCATGTTTTTCTATAAGAGTCCAGAAGGTATGTGGATACCATGTGGACAGAAGCAACAAAATGCAGTACAAATTACAATGCAGGATCTTGCTGCCAAGGGACTTGCTTCAAAGATCCTTCCTCCACCTATATCAAGAACCGATTTTGACAAAGTACTTGCTAGACAAAGACCTACTGTAAGCAAAGCCGACCTTGAGGTTCATGAGAGATTCACAAAGGAGTTCGGAGAGGAAGTCACCATTTCAGCATCTAGCTTTCTGTCCTCAACCCTTTTGCATATCATGGGGTTTGCCAAAATTTTGAGTTTCACCTTTCTCCTCTTTATTGGATATACTTTGGTGAATGGATCCACCCCAAAGCATTATATAATTTACATGGGAGATCATTCACACCCCAATTCAGAGTCTGTCATCAGAGCAAACCATGAGATACTAGCTTCAGTTACTGGAAGTCTCAGTGAAGCAAAGGCAACAGCTCTACACCATTACAGTAAAAGCTTTCGAGGTTTCTCCGCCATGATTACGCCAGAGCAAGCTAATAAGCTGGCAGAATATAACTCTGTTGTGTCTGTTTTTGAGAGCAAAATGAATAAGCTCGACACTACACATTCTTGGGATTTTCTTAGATTAGACTCGGTCTACAAGAATAACCATATAGCTCTGGATTCCACTTCTAATATCATTGTTGGTGTCATTGACTCTGGGGTGTGGCCGGAATCAGAAAGCTTCAATGATTATGGATTGGGTCCTGTGCCTGAGAAATTCAAGGGAGAGTGTGTTACTGGTGATAATTTTACACTAGCAAATTGCAACAAGAAAATCGTTGGTGCGCGGTTCTATTCAAAAGGGTTTGAAGCAGAAACTGGTCCTCTGGAAGACATTGTCAACAATATTTTCTTCAGGTCAGCTagagatagtgatggacatggaacacacactgcatccacaattgcaggatccattgttgtcaatgctagcttatttggcattgccaaaggaactgctagaggtggtgccccaagtgcaagacttgctatctacaaggcctgttggttcgaattgtgcagtgatgctgatgttttgtctgccatggatgatgccattcatgatggtCCAATTTACTTTGAGAATGCACTCAGTATAGGAGCATTCCATGCATTCCAAAAGGGAATTCTCGTTTCTGCTTCAGCTGGAAACTCAGTTTTTCCTCGCACTGCTTGTAATGTTGCTCCTTGGATCCTCACGGTTGCTGCTAGCACGGTAGACAGAGAGTTCAGTTCAAACATCTACCTTGGTAATTCAAAAGTTTTGAAGGGTTTATCTTTAAATCCGATAAAAATGGAAGATTCTCATGGTTTGATATATGGAAGTGCTGCTGCAGCCTCTGGAGTTTCAGCTACAAATGCTAGCTTCTGCAAGAACAATACTCTAGACCCTAACTTAATCAATGGAAAAATTGTTATCTGCACAATTGAAAGATTCACTGATAACAGAAGAGAGAAGGCCATAATAATAAGGCAAGGTGGTGGTGTTGGAATGATACTTATTGATCATAATGCAAAAGATGTTGGTTTTCAGTTTGTCATTCCAAGCACTCTTATTGGTCAAGATGCTGTAGAAGAGCTTCAAGCATACATAAACACAGATAAGAATCCTACTGCTATAATTTCCCCAACAGTAACTGTTGTTGGTACCAAACCTGCACCAGAAGCAGCAGCTTTCTCTTCCATGGGGCCAAATATAATAACACCAGATATTATTAAGGCAAGTTTAAACACTAAACAGTGgtttaaaatatcgcctgacatcacaggacctggagtgaatattttggcagcatggtctccagtggctactgaagccacagtcgaacaacaatctgtcaactataacatcatttcaggaacatcaatgtcttgtccacacatatctgcagttgcagcaattataaaatcttaccacccattatggacacctgcagccataatgtctgcagttatgacaacagCAACAGTAATGGATAACACATACCACCTCATAGGAAGAGATCCAAATGGAACTCAAACCACGCCATTCGACTACGGATCCGGGCATGTTAATCCAGCTGCATCGCTCAATCCTGGATTAGTATATGATTTCAGTTCCCAAGATGTTCTCGATTTTCTCTGCAGCAATGGTGCAAGTCCATCACAACTCAAAAACATCACTGGTGAACTTACTCAATGCCAGAAAGCTCCTATAGCATCCTACAACTTCAATTACCCTTCAATTGGTGTATCAAACTTGAATGGAAGTTTATCTGTTTATCGCACCGTTACGTACTATGGTCATGAACCAGCAGTATATGTAGCAAGTGTTGAAAATCCATCTGGTGTGAATGTTACAGTTACACCAGTGGAAATGAAGTTCTGGAAAATGGGGGAGAAGACAACTTTCAGGATTGATTTCAACCCTTTCATGAATAGCAATGGAAACTTTGTGTTTGGTGCATTGACATGGAACAATGGTAGACAAAGGGTTAGGAGTCCTATTGGTCTTAATGCTCCTGTGTCAGCTTTCACCCATATCCTGATAGCGTATTCGAGAAGGAAACATGCTGGAAAGAATTACACTTCTACGAAACTTGGGAATATTTTTGGAAGAAACGAACCAACTGCCCTTGTCATATACCTGCATCTTCAAAATCAACAACTTAAAAGAAATTCAATTGGAAAACTGCTACAAAACAAATTTGACCTTTCTACATTTGAAGCCATAAGCTGA 3873 0.3708 MYSNFKEQAIEYVKQAVQEDNSGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKTKPKNGGEGDGEDPEQSKLRAGLNSAIVREKPNVKWNDVAGLESAKQSLQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESEPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKAREIFTIMFIHFIEGWVHLGDTPHNLTESDFEHLARKSEGFSGSDVSVCVKDVLFEPVRKTQDAMFFYKSPEGMWIPCGQKQQNAVQITMQDLAAKGLASKILPPPISRTDFDKVLARQRPTVSKADLEVHERFTKEFGEEVTISASSFLSSTLLHIMGFAKILSFTFLLFIGYTLVNGSTPKHYIIYMGDHSHPNSESVIRANHEILASVTGSLSEAKATALHHYSKSFRGFSAMITPEQANKLAEYNSVVSVFESKMNKLDTTHSWDFLRLDSVYKNNHIALDSTSNIIVGVIDSGVWPESESFNDYGLGPVPEKFKGECVTGDNFTLANCNKKIVGARFYSKGFEAETGPLEDIVNNIFFRSARDSDGHGTHTASTIAGSIVVNASLFGIAKGTARGGAPSARLAIYKACWFELCSDADVLSAMDDAIHDGPIYFENALSIGAFHAFQKGILVSASAGNSVFPRTACNVAPWILTVAASTVDREFSSNIYLGNSKVLKGLSLNPIKMEDSHGLIYGSAAAASGVSATNASFCKNNTLDPNLINGKIVICTIERFTDNRREKAIIIRQGGGVGMILIDHNAKDVGFQFVIPSTLIGQDAVEELQAYINTDKNPTAIISPTVTVVGTKPAPEAAAFSSMGPNIITPDIIKASLNTKQWFKISPDITGPGVNILAAWSPVATEATVEQQSVNYNIISGTSMSCPHISAVAAIIKSYHPLWTPAAIMSAVMTTATVMDNTYHLIGRDPNGTQTTPFDYGSGHVNPAASLNPGLVYDFSSQDVLDFLCSNGASPSQLKNITGELTQCQKAPIASYNFNYPSIGVSNLNGSLSVYRTVTYYGHEPAVYVASVENPSGVNVTVTPVEMKFWKMGEKTTFRIDFNPFMNSNGNFVFGALTWNNGRQRVRSPIGLNAPVSAFTHILIAYSRRKHAGKNYTSTKLGNIFGRNEPTALVIYLHLQNQQLKRNSIGKLLQNKFDLSTFEAIS 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03376 1290 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 448 - -
Car06g03376 1290 Gene3D - 792 933 - -
Car06g03376 1290 MobiDBLite consensus disorder prediction 73 110 - -
Car06g03376 1290 MobiDBLite consensus disorder prediction 96 110 - -
Car06g03376 1290 Pfam Fibronectin type-III domain 1121 1214 IPR041469 -
Car06g03376 1290 PANTHER AAA DOMAIN-CONTAINING 1 448 - -
Car06g03376 1290 CDD PA_subtilisin_like 798 926 - -
Car06g03376 1290 SMART smart 2 79 IPR007330 -
Car06g03376 1290 Pfam Vps4 C terminal oligomerisation domain 382 446 IPR015415 -
Car06g03376 1290 PRINTS Subtilisin serine protease family (S8) signature 594 613 IPR015500 -
Car06g03376 1290 PRINTS Subtilisin serine protease family (S8) signature 675 688 IPR015500 -
Car06g03376 1290 PRINTS Subtilisin serine protease family (S8) signature 1004 1020 IPR015500 -
Car06g03376 1290 ProSiteProfiles Serine proteases, subtilase domain profile. 574 1075 - -
Car06g03376 1290 Pfam PA domain 839 912 IPR003137 -
Car06g03376 1290 Pfam ATPase family associated with various cellular activities (AAA) 167 296 IPR003959 GO:0005524|GO:0016887
Car06g03376 1290 Gene3D - 6 75 - -
Car06g03376 1290 CDD MIT_VPS4 4 77 IPR045253 -
Car06g03376 1290 Gene3D - 1092 1218 - -
Car06g03376 1290 Pfam Peptidase inhibitor I9 491 567 IPR010259 -
Car06g03376 1290 Gene3D - 298 429 - -
Car06g03376 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 445 IPR027417 -
Car06g03376 1290 ProSitePatterns Serine proteases, subtilase family, serine active site. 1005 1015 IPR023828 -
Car06g03376 1290 ProSitePatterns AAA-protein family signature. 268 287 IPR003960 GO:0005524|GO:0016887
Car06g03376 1290 CDD AAA 133 296 - -
Car06g03376 1290 SMART AAA_5 162 298 IPR003593 -
Car06g03376 1290 Pfam Subtilase family 595 1049 IPR000209 GO:0006508|GO:0008236
Car06g03376 1290 CDD Peptidases_S8_3 568 1041 IPR034197 -
Car06g03376 1290 SUPERFAMILY MIT domain 2 81 IPR036181 -
Car06g03376 1290 Pfam MIT (microtubule interacting and transport) domain 7 70 IPR007330 -
Car06g03376 1290 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 484 570 IPR037045 -
Car06g03376 1290 Gene3D - 125 437 IPR027417 -
Car06g03376 1290 SUPERFAMILY Subtilisin-like 569 1079 IPR036852 GO:0004252|GO:0006508
Car06g03376 1290 Gene3D Peptidase S8/S53 domain 596 1087 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03376 Car-Chr6 63143281 63158928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03376 492 1214 Subtilisin-like Serine Gene Family AT2G04160 41.612 6.81e-176 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03376 - - gmx:100792672 1267.29