Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03370 ATGGCAGAAGAACATAGATGTCAAGCTCAACGTCTCTGTGCAAACAACTGCGGTTTCTTCGGGAGTCCCGCCATGCAAGATCTCTGTTCCAAATGCTATCGTGATTTGCAGATCAAGGAACAGCGATCTTCTTCGGCGAAATTGGTTCTCAATCAAACCCTAGTTTCTCCGCAATCGATTTCTCCGGCGGAAATTCAACcgtcgtcgtcgatttcttcttcgtcatcgtcgtcggcgGAGGAACAGGTTGTTGATGGACCTTTGGAGGTTGAGGTGAAGGTGCAGCCGAATCGGTGCGGAACTTGTAGGCGGCGCGTGGGGTTGACGGGATTTAAGTGCAGGTGTGGATTGACGTTGTGTGGGTCCCACAGGTATCCGGAACAACACGGGTGTGGGTTCGATTTTAAGGGATTGGGAAGGGAACAGATCGCGAAGGCGAATCCTGTTGTGAAGGGAGAGAAGCTTCAAAAGATTTAA 477 0.4591 MAEEHRCQAQRLCANNCGFFGSPAMQDLCSKCYRDLQIKEQRSSSAKLVLNQTLVSPQSISPAEIQPSSSISSSSSSSAEEQVVDGPLEVEVKVQPNRCGTCRRRVGLTGFKCRCGLTLCGSHRYPEQHGCGFDFKGLGREQIAKANPVVKGEKLQKI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03370 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Car06g03370 158 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Car06g03370 158 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 158 - -
Car06g03370 158 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Car06g03370 158 SMART AN1_Zf_4 99 136 IPR000058 GO:0008270
Car06g03370 158 Pfam AN1-like Zinc finger 99 135 IPR000058 GO:0008270
Car06g03370 158 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 158 - -
Car06g03370 158 Gene3D - 1 82 - -
Car06g03370 158 MobiDBLite consensus disorder prediction 60 82 - -
Car06g03370 158 SUPERFAMILY AN1-like Zinc finger 91 153 IPR035896 -
Car06g03370 158 ProSiteProfiles Zinc finger AN1-type profile. 93 139 IPR000058 GO:0008270
Car06g03370 158 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Car06g03370 158 MobiDBLite consensus disorder prediction 60 85 - -
Car06g03370 158 Gene3D - 89 144 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03370 Car-Chr6 63082760 63083829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03370 1 158 C2H2 Transcription Factor Family AT3G52800 45.604 5.32e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03370 - - mesc:110625469 224.172