Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03362 ATGGCTAGCCAAAGAATTGGAGAAATTGGTTCGTCTGAGTCAGAACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATTACTACCTCAACATCAAGCTTAATGAATCAAGGGTCTTCTTTTGATTTTGGAGAGCTTGAAGAAGCAATTGTTCTACAAGGAATTAAGATTAGAAATGATGAAGGAAAAGCATCTTTATTCACAAGCAAGCCAGCAGCTACACTTGAAATGTTCCCTTCATGGCCAATTAGATTTCAACAAACACCAAGACTTGTAGCTTCTCTCACTTCTCCATCTTTGACCAATCCATATGGTGGATCAAAATCAGGAGGGGAAAGCACTGATTCAGGATCAACAGAGTTACAGTTTGATACAGATTCTCCAATAAGTGTAAAAGCATCTTCTTCAGATCATCAAAATCGTGCTTTTGATCAGATTCAACAACAGGAGACAGCAACTAATGATGTCTTAAGAACAGAAACATCACAGAATCAATCAACAGCTAAATCATATCAGGAAAAGAAGAAAGGAGCTAGTTCCACATCAGAAAAGACACTTGATCCAAAGACACTGAGACGTTTGGCACAAAACAGAGAAGCTGCAAAAAAAAGCCGTCTAAGGAAAAAGGCTTATGTACAGCAGTTAGAGACAAGTAGATTAAGGCTAGCCAATCTGGAGCAAGACCTTCAAAGAGCACGTTCTCAAGGACTGTTCATGGGTTGTGGTGGCAATACAAGCCCTGGAGCTGCAATATTTGACATGGAGTATGCAAGATGGGTGGAAGAAGATGAACGACAGTTGGTGGAGGTTAGAAACGGGCTACAGGGGGCATTGACGGATAATGAATTGAGAGTGATAGTGGAGGGATATTTGTGTCATTACGACGAGCTTTTCCAATTGAAAGGTGTGGCAGTTCATTCAGATGTATTTCACCTCATTAATGGCATTTGGACTTCTCCTGCTGAGAGACCCTTCCTTTGGATTGGAGGTTTCAGACCCTCAGACCTCATCACAATGTTGATGCAACAATTGGAACCCCTAGCAGAGCAACAAATGGTAGGGATATGTGAGCTAAGACACTCATCACATCAAGCTGAAGATGCTCTCACTCAAGGCCATGAACAACTCCAACACTCTATAGTTCACACCATCGCCGGAGGTCCCGTCGTCGATGGTGTGCAACAGATGGTCGCCGCCATGGCCAAGATTTCCAGCCTTGAAGGATTTGTCCGTCAGGTACTACTCTATTTCATTCATTCTTTCATGTTGCTCACTCTTTCATGTTGA 1293 0.4238 MASQRIGEIGSSESEPSSQHVPYGVLHGITTSTSSLMNQGSSFDFGELEEAIVLQGIKIRNDEGKASLFTSKPAATLEMFPSWPIRFQQTPRLVASLTSPSLTNPYGGSKSGGESTDSGSTELQFDTDSPISVKASSSDHQNRAFDQIQQQETATNDVLRTETSQNQSTAKSYQEKKKGASSTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRLRLANLEQDLQRARSQGLFMGCGGNTSPGAAIFDMEYARWVEEDERQLVEVRNGLQGALTDNELRVIVEGYLCHYDELFQLKGVAVHSDVFHLINGIWTSPAERPFLWIGGFRPSDLITMLMQQLEPLAEQQMVGICELRHSSHQAEDALTQGHEQLQHSIVHTIAGGPVVDGVQQMVAAMAKISSLEGFVRQVLLYFIHSFMLLTLSC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03362 430 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Car06g03362 430 MobiDBLite consensus disorder prediction 153 177 - -
Car06g03362 430 PANTHER TRANSCRIPTION FACTOR TGA9 65 414 - -
Car06g03362 430 MobiDBLite consensus disorder prediction 178 193 - -
Car06g03362 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Car06g03362 430 SMART brlzneu 187 245 IPR004827 GO:0003700|GO:0006355
Car06g03362 430 ProSiteProfiles DOG1 domain profile. 251 430 IPR025422 GO:0006351|GO:0043565
Car06g03362 430 PANTHER TRANSCRIPTION FACTOR TGA9 65 414 - -
Car06g03362 430 SUPERFAMILY Leucine zipper domain 191 233 IPR046347 GO:0003700|GO:0006355
Car06g03362 430 MobiDBLite consensus disorder prediction 1 23 - -
Car06g03362 430 Gene3D - 190 239 - -
Car06g03362 430 Coils Coil 210 237 - -
Car06g03362 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Car06g03362 430 MobiDBLite consensus disorder prediction 98 126 - -
Car06g03362 430 MobiDBLite consensus disorder prediction 153 193 - -
Car06g03362 430 Pfam bZIP transcription factor 191 231 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03362 Car-Chr6 62972558 62977258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03362 163 415 bZIP Transcription Factor Family AT1G08320 62.257 1.95e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g03362 DOG1 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03362 K14431 - gmx:100101904 544.273