Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03341 ATGGTAGAGCATATCCCAACTGGGTATCGCTTCTTCCCTACAGAAGAAGAACTTGTTGGCTTTTACCTAAACAAAAAGCTACAAGGAGAAGTAAATGATATAGATAAAGTTATTCCTGTTATTGACATCAATGGTGTAGAGCCATGGAACCTCCCAAGTCTTGCGGGAGAGCTTTGCCGCGATGAAAAAGAGCAATGGTTTTTCTTTTCGCCAGGACAAGAGAGAGAAGCTAGGGGAGGGAGACCTAATAGAACAACAGCTTGTGGATATTGGAAGGCAACAGGTTCTCCTGGCTATGTTTACTCTTCTGATAACAAAGTTATTGGAGTGAAGAAAAGCATGGTGTTCTATAAAGGAAAAGCTCCTAGTGGAAACAAAACTAAATGGAAAATGAATGAATACAGAGCCATTCAAATTTCTAACCAATCCAACATTGCCACCCCACAGttAAGACGGGAATTCAGCTTGTGTCGAGTGTATGTGATATCGGGAAGCTTTCGAGCATTTGATAGACGCCCATTAGAGAAGGAAAGAGTTTATGAATTGCAAGTTCGTGATATTGATCAGAACCAATTTGGTGCCACGTGTACTCATAATCAAGCTGCAAAAATGGATGCATTAAGTTCATTTGAAATTTCCCAATTTGAGGGACTCCATAGTACTCATATGCTTGAGGATGTTGGAGGTTCAAGTAGCACTAATTGGACTTTAAATAACaatgataatgataatgataatgataatgataatgataatgatGAGCTTCTACTTCAAGAACCACTATGGGAATGGGAATGTGAAAATTTTAAATGGCCCTAA 819 0.3797 MVEHIPTGYRFFPTEEELVGFYLNKKLQGEVNDIDKVIPVIDINGVEPWNLPSLAGELCRDEKEQWFFFSPGQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGVKKSMVFYKGKAPSGNKTKWKMNEYRAIQISNQSNIATPQLRREFSLCRVYVISGSFRAFDRRPLEKERVYELQVRDIDQNQFGATCTHNQAAKMDALSSFEISQFEGLHSTHMLEDVGGSSSTNWTLNNNDNDNDNDNDNDNDELLLQEPLWEWECENFKWP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03341 272 Gene3D NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Car06g03341 272 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 268 - -
Car06g03341 272 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 268 - -
Car06g03341 272 ProSiteProfiles NAC domain profile. 5 162 IPR003441 GO:0003677|GO:0006355
Car06g03341 272 MobiDBLite consensus disorder prediction 232 253 - -
Car06g03341 272 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Car06g03341 272 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03341 Car-Chr6 62531433 62533631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03341 1 272 NAC Transcription Factor Family AT5G22380 47.653 2.61e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g03341 NAM 1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03341 - - cam:101497878 536.184