Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03314 ATGGAATCTAGGATGGATCAATATGAGATCATGGAACAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTCTTGTTAATCACAAAGCTGAGAAGAAAAAATATGTGTTGAAAAAAATCAGGCTAGCTAGACAGACTGAAAGATGCAGAAGATCTGCTCATCAAGAGATGGCTCTTATTGCTCGAATTCAGCACCCTTACATTGTGGAATTCAAGGAGGCTTGGGTTGAGAAGGGTTGCTATGTTTGCATTGTTACCGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAAACAAATGGTGCTTACTTTCCTGAGGAGAAACTCTGCAAATGGTTCACTCAATTACTGTTGGCAGTAGAATACCTTCATTCAAATTATGTTTTACATCGCGACCTAAAGTGTTCCAACATATTTCTCACCAAGGATCAGAATATTCGCCTCGGAGACTTTGGGCTTGCTAAGACACTAAAAGCAGACGATTTGGCTTCTTCGGTGGTAGGAACTCCCAATTATATGTGTCCTGAACTCCTTGCAGATATTCCTTATGGATTCAAATCTGATATTTGGTCATTAGGCTGCTGTGTATACGAGATGGCTGCTCATCGCCCTGCCTTTAAAGCTTTTGATATGGCTGGATTGATAAGCAAGATAAATCGTTCTTCTATCGGTCCTTTACCTCCATGTTATTCACCTTCCTTGAAAATACTAATAAAAGGCATGTTAAGAAAAAGTCCCGAGCATCGACCAACCGCATCTGAGGTGTTGAAACATCCTTATTTGCAACCTTATGTGGATCAATATCGTCCATCGTTCACTCACCCAGTCGCCTTTCCACCCGAAAAATCGATTTCTGCTGTCAATGATACTAAAAAACATATGGCTGAAAGTCAGAACAGTAGTGCTTCAAGTAGTGACAAAGATAGTTTAATGTCTAATGAGAGAAACATTGCAACAACAGTGTCAAAGTATGATAGCAAAGCGACTGAGATCGATATTGCTTCGATTGATGATGATGGCTCGGAGCAAGAGGTAATAAAATCGTCTCATATTGAAACATGTTCTAATGTTGAATCTAAACAGCCAAAAACAATTAGAAATATCATGATGGCATTGAAAGAGGGAAGAGGTAGAGAAGCAACTTCTCCGATGAGAGGCAATCGCATAAAAGCCAGTGGAGTATCAACACAGAAAGTAAATGCTGACGTATCTTCTAAATTGCCTAAACCTACTTTCATTGCTCCTAGTTTGAAGCCTAATTTAGAGTCGCCAAGTGTTCCACTTGTAAAGGCAACGCCTGAGTCTGCGAAACGAATACAAGGATCGCAGCATTCAAAGCTCCAGTTGTTGATGACAGAGCCGTCACCAAAAGTTAAACCAAAACATGATATGACTCCACCATCTGGTTTTATCAAACAAGTAGACGCGGATGGAGTTCCTCCCAGGCCAAGACAAAGAACTCCCCCCAGCTTACTTCGACGACCTTTTTCCGGACGAATGAGGCTGGCAGGGCTTGATGTTCCGAATACAGCGAACGATACAGGGAAACTAGGACCAAGTAATACAGGCCAGGAGTCTGAGATGATCCATTGTCGGTTGATCAATGGAAATATACCGTATATGTCTAGACAGACTACAAGAGAGCCTCAGAAGAGGTCCGAAAGAAGTTCTAAAGGAATGCAAACAGACAGCAGTAATTCGGCCTCGTCTTCGGTTTCTATTCAAGGATGTGAACTTGCTGATGATGCAACAACTTTTATTGACATGAGAGAACATATACTTCGTGATCATGAAATTGTAACGAACAATGTAGGCGTCGAATCACGTCTGGACAGCAGCCCGTCTACAACATGTTCACATTGTAAGATGGCCGAAGAAGTGTCTGAGGAAACCTGTGAAGTCACCATGAATTTTCATAATAACACTATTAGTAGTAATGACAAAGTGAGTTCCAATTTAACTCTTGATCATCCTGTTGAAAATTCTAAGGCAATGTTTGGTTCAGAAGATAGTCTTCACAGAAATCAGATAACTATATCTACTGCTGATGCGGCTAAAGAAATCGAAGATCTTCGAGATATTTCCATGGAAACGGCTTTAACCAAGTCTCTCGAATATCCATCCTCAATTTCTAGAGAAAAGTCTGTTTGTCAAGAAGTCAGTTCGGTAAATGATAGGCCTGATGTAGTAAGCCAGATAAAACTTGCTTCTACATCCACCGATGACGATAAATTTACGGTGAGGGAACGATTATCATTGAGCGCTGAAACTTCTCCTCAAATTACCGCTACTAAAATATCGAGCCAGAAAATCTTGCAAGAGAAAGGAACTGCCATGCAGAATCATGCAGCACCAGAAAGACAAGATACCGGTCATTTTCCCCCAGCCTTTGATGATGTGATCCATGTTATACGCCATAGTAGTTACCGAGTTGGAAGCGATCAGCCGGTGAAAGAATCGGTTGAAATGGGAGTTCAGAACGTCGATGTTGGCAAGTATATCAACGCTGTAAGGGATGACATAGAAACGAGAAACATAAACTCTCCTATGACTCTTAAATCTTCAACTTGCTCAGAAGCTCCAAACTCGATATCCAATATTTCTGATCAGTTAGAAATGAGAAACACAAGTACAAGCACTCCTCCTACTCTCAAATCCTCTAGTTTCTCCGATACTGCAAGCTTAAAATCGAGCATTTCCGATCATCTTAAGGAACAAGATGTTAACAACACTGTTTCTGTCCTTTCAGAATCTGATTCATCTGAGCTTAATAAATGTAACAAAACTCCAACAACTGAAGACAAACCACCCGCTAAGGAAACACTTGATGTGAAATCGTTTAGGCAGAGAGCAGAAGCACTTGAAGAGCTATTAGAATTGTCTGCAGAATTGTTGCAGCACAATAGATTGGAGGAACTTCAAGTTGTTCTAAAGCCTTTTGGAAAAGATAAAGTCTCACCGAGGGAGACGGCTATTTGGTTAGCGAAGAGTCTTAAGGGAATGATGTCAGATGAAAATGGAGGAAGATGTTCATCGTCATCATGA 3048 0.4098 MESRMDQYEIMEQIGRGAFGAAILVNHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKTNGAYFPEEKLCKWFTQLLLAVEYLHSNYVLHRDLKCSNIFLTKDQNIRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFDMAGLISKINRSSIGPLPPCYSPSLKILIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFTHPVAFPPEKSISAVNDTKKHMAESQNSSASSSDKDSLMSNERNIATTVSKYDSKATEIDIASIDDDGSEQEVIKSSHIETCSNVESKQPKTIRNIMMALKEGRGREATSPMRGNRIKASGVSTQKVNADVSSKLPKPTFIAPSLKPNLESPSVPLVKATPESAKRIQGSQHSKLQLLMTEPSPKVKPKHDMTPPSGFIKQVDADGVPPRPRQRTPPSLLRRPFSGRMRLAGLDVPNTANDTGKLGPSNTGQESEMIHCRLINGNIPYMSRQTTREPQKRSERSSKGMQTDSSNSASSSVSIQGCELADDATTFIDMREHILRDHEIVTNNVGVESRLDSSPSTTCSHCKMAEEVSEETCEVTMNFHNNTISSNDKVSSNLTLDHPVENSKAMFGSEDSLHRNQITISTADAAKEIEDLRDISMETALTKSLEYPSSISREKSVCQEVSSVNDRPDVVSQIKLASTSTDDDKFTVRERLSLSAETSPQITATKISSQKILQEKGTAMQNHAAPERQDTGHFPPAFDDVIHVIRHSSYRVGSDQPVKESVEMGVQNVDVGKYINAVRDDIETRNINSPMTLKSSTCSEAPNSISNISDQLEMRNTSTSTPPTLKSSSFSDTASLKSSISDHLKEQDVNNTVSVLSESDSSELNKCNKTPTTEDKPPAKETLDVKSFRQRAEALEELLELSAELLQHNRLEELQVVLKPFGKDKVSPRETAIWLAKSLKGMMSDENGGRCSSSS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03314 1015 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 995 - -
Car06g03314 1015 MobiDBLite consensus disorder prediction 514 529 - -
Car06g03314 1015 MobiDBLite consensus disorder prediction 560 575 - -
Car06g03314 1015 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Car06g03314 1015 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Car06g03314 1015 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 995 - -
Car06g03314 1015 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03314 1015 MobiDBLite consensus disorder prediction 455 575 - -
Car06g03314 1015 MobiDBLite consensus disorder prediction 917 940 - -
Car06g03314 1015 CDD STKc_Nek 7 262 - -
Car06g03314 1015 SUPERFAMILY Protein kinase-like (PK-like) 4 317 IPR011009 -
Car06g03314 1015 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03314 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Car06g03314 1015 Gene3D Transferase(Phosphotransferase) domain 1 90 337 - -
Car06g03314 1015 Coils Coil 951 971 - -
Car06g03314 1015 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03314 1015 MobiDBLite consensus disorder prediction 291 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03314 Car-Chr6 62206482 62212484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03314 12 274 MAP Kinase Kinase Kinase AT3G06030 32.616 6.28e-36 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Car06g03314 Pkinase 7.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03314 K08857 - gmx:100818747 1438.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03314 06 62206482 62212484 Car06g03314 06 62206482 62212484 ECH
Car01g02260 01 48357362 48360675 Car06g03314 06 62206482 62212484 PCT