Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03312 ATGGTGGAAAAGAAAGTTGTCATCATAGGTGGTGGTGTTGCCGGTGCTATCCTAGCTAAAACTATTCAACATCATGCCAATGTCACTCTTATTGATCCGAAGGAGTATTTTGAGATTCCATGGGCAAGTTTAAGGGCTATGGTGGAGCCATCCTTTGCAGAAAGGACAGTGATAAACCATAGAGAGTATTTCACAAAAGGTGACCTTGTTATATCAAGTGCCATCAACATTTCTGAATCTGAAGTCTTTACTGCAGATGGCCGTAAGATTTCCTATGATTATCTTGTTATTGCAACTGGTCACACAGAACATATCCCCAAAACAAGGACTGAAAGACTTGACCAATACAAAGGAGAAAATACAAAGATAAAATCTGCACGTTCAGTTTTGATTATTGGAGGAGGTCCAACTGGTGTTGAGCTAGCAGCAGAGATTGCTGTTGATTTTCCTGATAAGAAAGTAACCATAGTTCACAAAGGATCAAGATTGCTTGAATATATTGGGACAAAAGCTTCAAGGAAGACATTAAAATGGCTTAAATCAAGAAAAGTTGATGTGAAATTAGAACAATCAGTTGACTTAGACTCCTTCACAAATGAAAATAGGACATATAAAACTTCAGCTGGTGAGAGTATAGAAGCTGATACACATTTTGTGTGCATAGGGAAACCACTTGGTTCGGCATGGCTTGGAGAAACTCTTTTGAAAACTGATTTAGATAGTAATGGAAGGATTCAAGTTGATGAATATTTGAGAGTTAAGGGTAGGAGTAATATTTTTGCAATTGGAGATATTACTGATATTCAAGAAATCAAACAAGGAGTGTATGCACAAGGTCATGCTCAATTGGTAGCCAAGAATCTAAAGCTATTGATAGAAGGAGGAGGGAAAGAAAATAAATTGGGAATTTACAAAGCACAACCACCAATGTCTATTGTTTCACTTGGAAGAAAACATGGAGTTGCACAATTCCCTTTCATGACAGTTGTTGGAAGATTTCCTGGTATGATCAAATCAGGAGATTTGTTTGTTGGGAAAACAAGAAAGGAATTAGGACTTGAACCTAAAATTAAAAAATCTTAA 1083 0.3684 MVEKKVVIIGGGVAGAILAKTIQHHANVTLIDPKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLVISSAINISESEVFTADGRKISYDYLVIATGHTEHIPKTRTERLDQYKGENTKIKSARSVLIIGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGTKASRKTLKWLKSRKVDVKLEQSVDLDSFTNENRTYKTSAGESIEADTHFVCIGKPLGSAWLGETLLKTDLDSNGRIQVDEYLRVKGRSNIFAIGDITDIQEIKQGVYAQGHAQLVAKNLKLLIEGGGKENKLGIYKAQPPMSIVSLGRKHGVAQFPFMTVVGRFPGMIKSGDLFVGKTRKELGLEPKIKKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03312 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Car06g03312 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 92 110 - -
Car06g03312 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Car06g03312 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 230 - -
Car06g03312 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Car06g03312 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Car06g03312 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 280 IPR023753 GO:0016491
Car06g03312 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 360 - -
Car06g03312 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 360 - -
Car06g03312 360 Gene3D - 1 346 - -
Car06g03312 360 ProSitePatterns EF-hand calcium-binding domain. 238 250 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03312 Car-Chr6 62172940 62176433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03312 3 272 Chloroplast and Mitochondria Gene Families AT4G21490 26.300 3.69e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03312 K22745 - gmx:100817682 584.719