Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03311 ATGGGGTTGTGTATTTTCTGGAAAAGTTTCAACCTTGATTATCATTTTCACAGAATTGTCAATATAGCCATGGTATTTATTCAGATCAAAGTTTACATCTTTCTCTTATTTTCCCTTATGATTACAATGTCTTATGGTGAAACCAACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGGTTAATGAATCCAGAGCTTCTCAAATGGCCTGATAACGGAAATGACCCTTGTGGCCCTCCTTTATGGCCTTATGTGTTCTGTTCTAATGGTAGAGTTACTCAGATTCAAGCTAAGAATCTTGGTCTTAAAGGGTCATTGCCTTTAAATTTTAACCAACTTTCTGAGCTTCAAAATTTGGGTCTTCAAAGGAACAATCTAAGTGGAATGTTACCTAGTTTCAGTGGATTGTCAAAATTGCAATATGCTTTCTTGGATTACAATGAGTTTGATGCAATTCCAATTGATTTCTTCAATGGACTCAACAGTCTTCAGGTTTTGTCTTTAGAAGAAAACCTTTTGAATTCTTCTACTAATGGTTGGTCATTTCCTTTGGACTTGAAAAATTCAGTTCAATTAACAAATCTTTCTTTTGTGAACTGTAATTTGGTTGGAACTCTGCCTGATTTTCTAGGAACATTGCCTTCATTGACAGATTTGAGGCTTTCAGGTAACAGTATTTCAGGTGAAATTCCTAATAGTTTCGGTCAATCATCGATTCAAGTTCTATGGTTGAATGATCAACAAGGTGGTGGAATGACAGGTTCTATTAATGTTATTGCTTCAATGACATTTTTGAAACAAGTTTGGTTACATGGAAACAAGTTCACAGGAGCAATTCCATCAGACATTGGTAATTTAGTTTCTTTGCAAGAGCTTAACCTCAATAGTAATCAACTTGTTGGTTTGATTCCAAATTCATTAGCAAATTTGGAACTTAATACACTTGTGTTGAACAATAACATGTTCTTTGGTCCAATACCAAATTTTAAGGCTGCAAAAGTATCTTATGATTCGAATTTCTTTTGTCAAACTAAGCCTGGTCTTGATTGTGCTCCTAATGTTAATATCTTGTTAAATTTTCTCCAATATATGAATTATCCATCAAATCTCATTCCTAAATGGGTTGGTAATGATCCTTGTGGAGAATTATGGTTTGGATTAAGCTGCAATCATAATTCAGAAATATCTATAATCAATTTGCCTAGACAAAAGCTTAATGGTACATTGAGTCCTTCACTTGCTATGTTAGATTCATTGCTTGAGATTAGGCTTGGTGGAAACAATATAACTGCTAATGTACCTAGTAATTTTACTGACTTGAAATCTTTGAAGTTGTTGGATTTAAGTGATAACAATGTTGAACCTCCATTGCCAAAGTTTCATGATGGTGTTAAAGTTGTCATCGATGGTAACCCTCTTTTCGCTAATCAAACTGGAAAGATTCCTCTTCCTCCTATTAGCAGCCCTTCCCCTTTAAGTGAACAGCCTTCACCACACAGCGTGTCGCCGCCGCCGCATTCGTCCCCCTTTGTTCCACCTTCCTCTAATCATAGTGACGGCCCTAATCAGTCTTGGCATGGCCAAATGAATCCTCAGCCGAGTAACTCAAATAGATTTAAAATAGTTGCAATAGTGGCTGGAGTTGCAGTGTTTTCATTTGTAGCTCTTTTTTTCATTTATCTCTTTGTATGCTGTTGTTTGAAGAAAAAGAAGAAAAAGGGTTCATTTGACGCTTCTGGTATTGTTGTTGGTCACACTCATGATCCATCCGATCCGAAAATGATGGTTAAATTTGCAGTGTCGGATAGCACAAGTTTATCGACGAAGACAGGAATAAGTTCTCTGACAAACAATAGCGGCGAAACGGAAAGCTATCATTTAATTGAGGCTGGTAACCTTGTGATTTCTGTTCAAGTTCTACGCAAGGTTACCAACAATTTCGCTTTGGAGAATGAGCTAGGCCGTGGTGGATTTGGAACCGTTTACAAAGGCGAACTAGAAGACGGGACGAAAATAGCAGTTAAAAGAATGGAATGTGGAACTGTTAGCCGTAAAGGAATTGACGAGTTTCAAGCCGAAATAGCTGTTCTTTCGAAGGTTCGACACCGGCATTTGGTGTCATTGTTAGGCTATTCTGTTGAAGGAAATGAGAGGCTTTTGGTTTATGAGTATATGCCACTGGGTGCTCTAAGTAGACACCTTTTCCATTGGAAAAGCTTGAATTTGGACCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTTGATGTTGCTAGAGGGATGGAGTATCTTCATAGTCTTGCCCGGGAGACTTTTATCCATCGAGACCTCAAGTCTTCAAATATTCTACTTGGCGATGATACTCGAGCGAAAGTTTCGGATTTTGGTTTGGTGAAACTTGCCCCCGATGGTGAGAAGTCTTTGGCAACAAGACTTGCTGGAACATTTGGATACCTTGCCCCTGAGTATGCAGTGATGGGGAAAATCACCACCAAAGTTGATGTTTTCAGCTACGGTGTTGTGTTGATGGAACTTCTGACCGGATTAATGGCTCTCGACGAAAGACGACCAGAGGAAAACCGTTACTTGGCCGAATGGTTTCGACAAATTAAATCAAACAAAGAAAAGCTTATGGCAGCCATCGATCCATCACTCAAAGTAAGCGAAGAAACTTTCGAGACTATTTCGATTGTAGCTGAACTCGCCGGACATTGCACTGCTAGGGAACCAAACCATAGGCCGGATATGGGGCACGCAGTCAAGGTACTGTCTGAGTTAGTCGAGAAATGGCTGCCGGTTGACGAAGAGTTCAATTATGGCATCGGAGGCGTTGACTTCGGTCAACCGCTTCCGCAAATGTTGAAGATTTGGAAGGAAGCTGAAGGTAGAGATATGAGCTATACAAGTCTTCAAGATAGTAAAGGAAGTATACCAGCTAAGCCAGCTGGTTTTGCAGATTCCTTTACTTCTTCTGATGCAAGGTGA 2991 0.3928 MGLCIFWKSFNLDYHFHRIVNIAMVFIQIKVYIFLLFSLMITMSYGETNPNDLKILNDFRKGLMNPELLKWPDNGNDPCGPPLWPYVFCSNGRVTQIQAKNLGLKGSLPLNFNQLSELQNLGLQRNNLSGMLPSFSGLSKLQYAFLDYNEFDAIPIDFFNGLNSLQVLSLEENLLNSSTNGWSFPLDLKNSVQLTNLSFVNCNLVGTLPDFLGTLPSLTDLRLSGNSISGEIPNSFGQSSIQVLWLNDQQGGGMTGSINVIASMTFLKQVWLHGNKFTGAIPSDIGNLVSLQELNLNSNQLVGLIPNSLANLELNTLVLNNNMFFGPIPNFKAAKVSYDSNFFCQTKPGLDCAPNVNILLNFLQYMNYPSNLIPKWVGNDPCGELWFGLSCNHNSEISIINLPRQKLNGTLSPSLAMLDSLLEIRLGGNNITANVPSNFTDLKSLKLLDLSDNNVEPPLPKFHDGVKVVIDGNPLFANQTGKIPLPPISSPSPLSEQPSPHSVSPPPHSSPFVPPSSNHSDGPNQSWHGQMNPQPSNSNRFKIVAIVAGVAVFSFVALFFIYLFVCCCLKKKKKKGSFDASGIVVGHTHDPSDPKMMVKFAVSDSTSLSTKTGISSLTNNSGETESYHLIEAGNLVISVQVLRKVTNNFALENELGRGGFGTVYKGELEDGTKIAVKRMECGTVSRKGIDEFQAEIAVLSKVRHRHLVSLLGYSVEGNERLLVYEYMPLGALSRHLFHWKSLNLDPLSWSQRLAIALDVARGMEYLHSLARETFIHRDLKSSNILLGDDTRAKVSDFGLVKLAPDGEKSLATRLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDERRPEENRYLAEWFRQIKSNKEKLMAAIDPSLKVSEETFETISIVAELAGHCTAREPNHRPDMGHAVKVLSELVEKWLPVDEEFNYGIGGVDFGQPLPQMLKIWKEAEGRDMSYTSLQDSKGSIPAKPAGFADSFTSSDAR 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03311 996 SUPERFAMILY L domain-like 356 461 - -
Car06g03311 996 MobiDBLite consensus disorder prediction 486 513 - -
Car06g03311 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Car06g03311 996 Gene3D Phosphorylase Kinase; domain 1 610 726 - -
Car06g03311 996 MobiDBLite consensus disorder prediction 514 534 - -
Car06g03311 996 Pfam Leucine rich repeat N-terminal domain 50 90 IPR013210 -
Car06g03311 996 Pfam Leucine rich repeat N-terminal domain 357 392 IPR013210 -
Car06g03311 996 Gene3D Ribonuclease Inhibitor 50 349 IPR032675 -
Car06g03311 996 MobiDBLite consensus disorder prediction 486 534 - -
Car06g03311 996 SMART serkin_6 649 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03311 996 Gene3D Ribonuclease Inhibitor 354 479 IPR032675 -
Car06g03311 996 Pfam Protein tyrosine and serine/threonine kinase 651 923 IPR001245 GO:0004672|GO:0006468
Car06g03311 996 SUPERFAMILY L domain-like 49 332 - -
Car06g03311 996 MobiDBLite consensus disorder prediction 970 996 - -
Car06g03311 996 PANTHER OSJNBA0070M12.3 PROTEIN 28 996 - -
Car06g03311 996 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Car06g03311 996 Gene3D Transferase(Phosphotransferase) domain 1 727 938 - -
Car06g03311 996 CDD STKc_IRAK 655 928 - -
Car06g03311 996 SUPERFAMILY Protein kinase-like (PK-like) 624 925 IPR011009 -
Car06g03311 996 ProSiteProfiles Protein kinase domain profile. 649 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03311 996 SMART LRR_typ_2 215 239 IPR003591 -
Car06g03311 996 SMART LRR_typ_2 138 161 IPR003591 -
Car06g03311 996 SMART LRR_typ_2 162 185 IPR003591 -
Car06g03311 996 SMART LRR_typ_2 418 441 IPR003591 -
Car06g03311 996 SMART LRR_typ_2 288 311 IPR003591 -
Car06g03311 996 SMART LRR_typ_2 115 137 IPR003591 -
Car06g03311 996 PANTHER OSJNBA0070M12.3 PROTEIN 28 996 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03311 Car-Chr6 62153824 62157904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03311 106 928 Receptor kinase-like Gene Family AT1G55610 31.207 4.19e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Car06g03311 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03311 - - cam:101505581 1892.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03311 06 62153824 62157904 Car06g03311 06 62153824 62157904 ECH