Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03308 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTTTGTTCTCAGAATCAGTGGTGTTATGCTGTTTTTTGGAAGATCGGTTGTAATAATTCGAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCCCTGCCATCTCCTTTCCTTCAACAAATTGGTGCGACGTCTAACTTTCCTTACCGAGATGCAGAAGGATGCTGGTTTTCTACCGATTCTCAGCTAAGGATTCAAGAAGACGACAGAGTCTGTTCCTTGATTAACAAAATGATGGTGAATAATTCTGTCAATGTTGCTGGTCAAGGGATACTTGGACGGGCGGCATTTACCGGAAGTCATCAGTGGATTCTTTTGAACAATTTTATTAAAGATGCATATCCACCTGAGGTATTAACCGAGTTGCAGTGCCAATTTTCAGCTGGAATGCAGACGGTGGCAGTTATTCCTGTACTTCCCCACGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAGAATATTGGATTTGTTAATGATGTGAAGAGTTTGATCTTTCAATTGGGACGTGTTCCCGGTTCTCTTCTATCTGAAGACTATTCAGCGAGAATTTCTAATGAAAGACATGTGAACGATTGTGTGCCTGTGTCTTTCGATCCACAAGTCATTACTTCAAACTGCACTCCCTCGGTAGCTAATGGTTCTAACCAACCGAGTAATTCATCTCACGGTCCAATTCCTATTTCTCAACCACATTTTTTTCAAAGGGGAGAAATAAATAGTTACCATGGTTCTATATTGACACCTCAATCACAATCCCAAAACCTAAACCAGATATTTAATAGCCTTTGCCAGCCAAAGGCTCAATCAGCAACTAAAACAAGTTTCAATGCCCAACGAGAGAACACAATTGTGAAGGCTGAAGCTGAAGTCATACCTGCAAATCTTGATTCACGTTTTCATCGGCGTTCGGTTTCATATAATGCAAGATCTGTGCCCAATGAATTAGCTGATTCCAATGTTTCCAATCTGAATGGTTTCAGCCATAAACATATGGAGCAACAAATCTTATCAGGTATCGGGATACAAAGTCACGGTAATCACAATATGAATCCATTGAGTGCCGTAAATATGTCTCAACTGAAAACAGATGGAGGCCAAATTTATTATCAAAATTCTGACAACACTTCACTGCTTGGAGGAATCCCAATATGTAGTGGAATGAGTAACAATCTTCTAAGGACAAATATGATTAACTGCTCGGTTTCAAACGCTCCTGAATTATCCATTACTGATTTTTCTGGATCACAAAAAGAAGGGTTTGGAATTCAAAATGCTAATTTGATTAATCAATCTGCTACCTATCACATGCATCTAGAAGGCTCTGATGGGAAGAATCTCCCTGTTGATTTAAAGCATGCTCGAGATGATTTGGTTTCCATGGATCAACGGATAGATGATATGCTTCAGGCCCTGACGATCCCATCATCGCTTCATCTTAAGGAGCATGTGCCTATGAATAATCGCATCCCTGGTTTTGAACATGAAGAAGCTTGCACTCAACTTTCATCAGGTGATGATGATTTGTTTGACGTCTTGGGTGTGGATTTCAAAAGGAATCTGCTGAATGGAAACTGGAATGAGTTGCTTCTTGCCAATGAATCCGATGCCAATGCAGAAAAACTAGATAAAAAGGCGATGTGTACGAACTTTCCGGTTGTAAGTCATGATAATATTTATGCGGTTAACGAAGCAATATCAAACAATGGCATCTTCTCTGGAACAAACACTGACCATCTCTTAGATGCTATGATCTCGAAGACTCAATCTGCCGCGAAGCAAAATTCTAATGAAATGTCTTGCAGGACAACAGTAACAAGGATTAGTACCAAATCTGTTCCCTCTCCTGCTTGCATGCAGATTACGGGCAATCATGTTGTCGAAGGGCGATTTTTTGATTTTCCAAAGACGGAGGTTAAAACAGGTGCTGCGGAAACAAGTTCTCTTAGGTCTGGTTGCAGCAAAGATAATGCTGGAAACTGTTCTCAATCCACTTCCTTATATGGGTCTCAAATTAGTTCATGGGTGGAGAATGGTAGTAGTAATGTGAAGCGTGAAAATAGTGTTTCGACTGGATACTCTAAACGGCCTGATGAAGTTTGCAAATCAAATCGTAAAAGGCTTAAACCTGGAGAGAATCCAAGGCCTCGACCCAAAGATCGTCAAATGATTCAAGATCGTGTGAAAGAGTTACGGGAAATTGTGCCTAATGGAGCAAAGTGTAGCATAGACGCACTTCTTGAACGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACGAAGCATGCTGACAAGCTGAAACAGACAGGAGAATCCAAGATTGTTAGTAAAGAAGGTGGATTGTTATTAAAAGACAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGTTCACAATCAATGGTTTGCCCTATCATAGTCGAGGATCTTAATCATCCCCGTCAAATGCTAGTCGAGATGCTTTGTGAGGAACGGGGCCTCTTTCTTGAAATAGCCGATTTAGTCAAAGGATTGGGGTTAAATATCTTGAAAGGGGTCATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTTCTGTTGAGGTATTAAACCAGTAG 2640 0.4083 MGFLLKEALKTLCSQNQWCYAVFWKIGCNNSKLLIWEDCYYEPLPSPFLQQIGATSNFPYRDAEGCWFSTDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGSHQWILLNNFIKDAYPPEVLTELQCQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKSLIFQLGRVPGSLLSEDYSARISNERHVNDCVPVSFDPQVITSNCTPSVANGSNQPSNSSHGPIPISQPHFFQRGEINSYHGSILTPQSQSQNLNQIFNSLCQPKAQSATKTSFNAQRENTIVKAEAEVIPANLDSRFHRRSVSYNARSVPNELADSNVSNLNGFSHKHMEQQILSGIGIQSHGNHNMNPLSAVNMSQLKTDGGQIYYQNSDNTSLLGGIPICSGMSNNLLRTNMINCSVSNAPELSITDFSGSQKEGFGIQNANLINQSATYHMHLEGSDGKNLPVDLKHARDDLVSMDQRIDDMLQALTIPSSLHLKEHVPMNNRIPGFEHEEACTQLSSGDDDLFDVLGVDFKRNLLNGNWNELLLANESDANAEKLDKKAMCTNFPVVSHDNIYAVNEAISNNGIFSGTNTDHLLDAMISKTQSAAKQNSNEMSCRTTVTRISTKSVPSPACMQITGNHVVEGRFFDFPKTEVKTGAAETSSLRSGCSKDNAGNCSQSTSLYGSQISSWVENGSSNVKRENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGLFLEIADLVKGLGLNILKGVMEARNDKIWARFSVEVLNQ 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03308 879 MobiDBLite consensus disorder prediction 691 735 - -
Car06g03308 879 MobiDBLite consensus disorder prediction 710 735 - -
Car06g03308 879 CDD bHLH_AtLHW_like 724 793 - -
Car06g03308 879 MobiDBLite consensus disorder prediction 221 242 - -
Car06g03308 879 MobiDBLite consensus disorder prediction 691 706 - -
Car06g03308 879 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Car06g03308 879 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 876 - -
Car06g03308 879 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 876 IPR043561 GO:0003700|GO:0006355
Car06g03308 879 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 720 769 IPR011598 GO:0046983
Car06g03308 879 MobiDBLite consensus disorder prediction 221 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03308 Car-Chr6 62093808 62100562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03308 508 875 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 49.866 9.97e-100 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03308 - - aprc:113857443 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03308 06 62093808 62100562 Car06g03308 06 62093808 62100562 ECH
Car01g02267 01 48410066 48416607 Car06g03308 06 62093808 62100562 PCT