Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03307 ATGTACTTTCATTGTAACAATAACAGTTCTGAATTCCAACCGTCGGCAGAAGGATTACAGACACTTTACCTTATGAATCCAAACTACGTACCTTACTCTCATTCGCCACACACACAAAACATGCTTTTCAACGCTACCACTAATAATTCATCTTCTCACCACGCGCTTGATTTGGTCAAATCACCTCACGCGCCTTCGTTTACACTTCCTTCAATTTCTAACTTTCATGGATCCAACACCGCCGACACTCCCACACAACACTATGAGCTTTCCGGCTTCCACGCGCTTGCCTCTGCGGCAAACGCAACTTCCCGTTCCCACTATAATTTGTGGGGATCAGGTAATTTGATACCTGATCAATCTGTTACAGCGACAACAACTAATAGTGTTGTTGTCGCTGTGACAACAACTGCTGCGGCGGAATTTCCGCCGCAAATTGATTTTCATATGCCAATTTATCAACGTAGTTTGTCTCTGAGTCTCTCGTCAAACCAAACGCCTTATCGGTCAGTCTCCGGGGAGGTTGAGGTGTGTCCGAGTAGCCGTGGCGGTGGGATTTCGAGCATGCACGGTGTTTTTCTGGGGTCGAAGTATTTGAAAGCGGCGCAGGAGCTTCTTGATGAATTTGTGAATGTGGATAAGGGAATCTACAAAGGAGAAAATAGTAATAACAATAATAAAGAGAAGAAGAAAACGAATGTTGAATGGAGTTCAAGTGGTGATGGAGGAAAGTTACAAGTAGGTGAATTAAGCACTGCACAGAGACAAGAACTTCAGATGAAGAAGTCCAAACTTGTTAGCATGCTCGATGAGGTAGAACTAAGGTACAGACAATACCACCATGAAATGCAAGTTGTGACATCATCATTTGAGCAAGCAGCAGGATATGGAGCTTCAAAATCATACACATCACTTGCCTTAAAGACAATCTCAAAGCAATTTAGAAGTCTTAAAGATGCAATATGTTCACAAATAAAGAGAACTAGCAAGAGTTTAGGTGAAGATGATTGCTTAGGAGTTAAGGTAGAAGGTTCTTCTAGGTTAAGGTTTGTCGATCACCATCTCCGACAACAACGGGCATTACAACAACTTGGAATGATCCAGAACAATGCTTGGAGGCCTCAACGAGGTTTGCCTGAACGAGCTGTTTCTGTTCTACGTGCTTGGCTTTTTGAGCATTTCTTGCATCCCTATCCCAAGGACTCCGATAAGGTTATGCTTGCAAGACAAACTGGACTTACAAGGAGTCAGGTGTCTAACTGGTTTATAAATGCTCGAGTTCGGTTATGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAATCAAGGATCAAGAGCACAATAATGATAACACAAATAGATCAAAAGAATCAAGTAAAGAACTTGATCAAAATAACGTTCTTCATTCAAAAACAGAAATCTTCAACAACCAAAACACTTCTCAAAAAGAGATTTCAAATAATTCCAATAATTCATTGTCAACATCTCCAATAGGAGGAGGAACATTTAGAGAATCCAACAACACAAAGTTTGAGGTTGAAATTGAAGGGAATCATTACAAAGATGGATACTCTTTAATGACTGAAAATGAAAACCATATTAATGGTGGTGATTTTGGATCATTCTCAATGGATAATATTGGAAGGTTTAATGTTAGTGATCAACAATTGGCTCCTAAGTGTCATGGAAATGGTGTTTCTTTAACTCTTGGACTACCTCATAATGAGAATGTCTCTCTCTCTTCAACACAACATGGATTTCTCTCTCAAAATATACATTTGGGAGGGAGGATTAATGAAATGGGTGGCAATGAAAATGAGTTTTGTGCAATCAACAATAATAATGAGAGTGTTGATATTCAAAACAGAAAGAGGTTTGCTGCTCAATTATTGAGAAATTTTGTTGTCTAA 1911 0.3961 MYFHCNNNSSEFQPSAEGLQTLYLMNPNYVPYSHSPHTQNMLFNATTNNSSSHHALDLVKSPHAPSFTLPSISNFHGSNTADTPTQHYELSGFHALASAANATSRSHYNLWGSGNLIPDQSVTATTTNSVVVAVTTTAAAEFPPQIDFHMPIYQRSLSLSLSSNQTPYRSVSGEVEVCPSSRGGGISSMHGVFLGSKYLKAAQELLDEFVNVDKGIYKGENSNNNNKEKKKTNVEWSSSGDGGKLQVGELSTAQRQELQMKKSKLVSMLDEVELRYRQYHHEMQVVTSSFEQAAGYGASKSYTSLALKTISKQFRSLKDAICSQIKRTSKSLGEDDCLGVKVEGSSRLRFVDHHLRQQRALQQLGMIQNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEHNNDNTNRSKESSKELDQNNVLHSKTEIFNNQNTSQKEISNNSNNSLSTSPIGGGTFRESNNTKFEVEIEGNHYKDGYSLMTENENHINGGDFGSFSMDNIGRFNVSDQQLAPKCHGNGVSLTLGLPHNENVSLSSTQHGFLSQNIHLGGRINEMGGNENEFCAINNNNESVDIQNRKRFAAQLLRNFVV 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03307 636 SMART prehox3 187 323 IPR006563 -
Car06g03307 636 SMART HOX_1 372 436 IPR001356 GO:0003677
Car06g03307 636 MobiDBLite consensus disorder prediction 441 464 - -
Car06g03307 636 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677|GO:0006355
Car06g03307 636 Coils Coil 255 275 - -
Car06g03307 636 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 592 - -
Car06g03307 636 Pfam Associated with HOX 194 321 IPR006563 -
Car06g03307 636 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677
Car06g03307 636 SUPERFAMILY Homeodomain-like 373 438 IPR009057 -
Car06g03307 636 Gene3D - 368 447 - -
Car06g03307 636 MobiDBLite consensus disorder prediction 481 505 - -
Car06g03307 636 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 592 - -
Car06g03307 636 MobiDBLite consensus disorder prediction 217 241 - -
Car06g03307 636 CDD homeodomain 372 433 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03307 Car-Chr6 62009761 62014195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03307 2 636 Homeobox Transcription Factor Family AT2G35940 41.565 1.50e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Car06g03307 POX 2.8e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03307 - - cam:101506552 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03307 06 62009761 62014195 Car06g03307 06 62009761 62014195 ECH