Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03298 ATGGGTGTCCCAGGGAAGTGGATTAGAGCATTGGTTGGTCTAAAGAAATCAGAAAAGTCTGAGTCCTCGGAGAAGGATGGAAATAAGGCTAGCAAGTTTCGCCATCGGAGAAAGCACTCAATCGAAATTGACAGTAGCAAACTTCAAAATGAGTTTGATCATGATGATGGTGCTGCACCTATTGGAGATGCAGATCATGCAAATCCCCAATCAAACCTTGATGCACATTATTCTCCGTCTACTTCACAACAAGTACAAAATGCTGCACATAATCCTCAAATCTCGAGAGAAGAATGGGCTGCAATATGCATTCAAACAGCATTTCGAGGATTTCTCGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTTGTAAGAGGTCATGCAGTAAGAAAACAAGCTGCAATAACTCTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCACGGCGTGTTCGCTTGTCGTTGGAAACTCAAACAGAACAACAAAAACTTCAGCAACAGCTTGTAAATGAAGCTCATGTTCGAGAAATTGAAGAAGGTTGGTGTGACAGTGTGGGTTCTGTTGAAGAAATTCAAGCCAAAATATTAAAGAGGCAGGAGGCTGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTAGCGAATCAGTGGCAGGCAGGCTCAAGGCAGCAGGCTGTTTCTTCTGGCTTTGAACCCGATAAAAGTAGTTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTACGTCCTTGGGAGAATCGTTTTCTTGACATTAATATGAAGGACGGAGTAAAGGTAGACGAAAATGATGTCATGGATGGTAGGAACGGCGTCAGACCTCAGTTCAGGTCTACCACTGTGAAATCAGTTCTGCCAAATATTCATCCAATCGTTGCAAGTCACAAATCCGGTCCTTCCTTCTCTGATGGCTGTGATTCTTCTTCCCCTAGCAAGTCAGCAGGTTTGATTGAGACATCGAACACACAATCTGTTAAACCAAAATCTGATGCAAATGTTCAAAATCCCGTTGAAGAAACCAACTCAAAGTCTAGAAATCAAAGATCTCAAAGTAATCCTAAGGAGAGAAATTCGCAGGCAGATAAACAGGCAAAAAAGCGATTATCTCTTCCTAACAACGCAGGGGTTGGTTCCGCAGCTCAAACGGCCAAATATCCTACTAGAACTAATGTGAAAGGGACGCGAAGCATGCAAAAGCCTACAAGGGATAAACCTAAGCTCAATGAAGGAGGGGATGGGAATCTTACTAAATCTGTTCCACAACCTGAAGTTGGGTAA 1326 0.4419 MGVPGKWIRALVGLKKSEKSESSEKDGNKASKFRHRRKHSIEIDSSKLQNEFDHDDGAAPIGDADHANPQSNLDAHYSPSTSQQVQNAAHNPQISREEWAAICIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLSLETQTEQQKLQQQLVNEAHVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALANQWQAGSRQQAVSSGFEPDKSSWGWNWLERWMAVRPWENRFLDINMKDGVKVDENDVMDGRNGVRPQFRSTTVKSVLPNIHPIVASHKSGPSFSDGCDSSSPSKSAGLIETSNTQSVKPKSDANVQNPVEETNSKSRNQRSQSNPKERNSQADKQAKKRLSLPNNAGVGSAAQTAKYPTRTNVKGTRSMQKPTRDKPKLNEGGDGNLTKSVPQPEVG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03298 441 MobiDBLite consensus disorder prediction 37 61 - -
Car06g03298 441 PANTHER IQ-DOMAIN 5-RELATED 2 404 - -
Car06g03298 441 MobiDBLite consensus disorder prediction 316 373 - -
Car06g03298 441 PANTHER IQ-DOMAIN 5-RELATED 2 404 - -
Car06g03298 441 MobiDBLite consensus disorder prediction 71 91 - -
Car06g03298 441 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Car06g03298 441 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Car06g03298 441 MobiDBLite consensus disorder prediction 14 91 - -
Car06g03298 441 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Car06g03298 441 MobiDBLite consensus disorder prediction 310 441 - -
Car06g03298 441 MobiDBLite consensus disorder prediction 14 30 - -
Car06g03298 441 MobiDBLite consensus disorder prediction 390 412 - -
Car06g03298 441 SMART iq_5 96 118 IPR000048 GO:0005515
Car06g03298 441 SMART iq_5 119 140 IPR000048 GO:0005515
Car06g03298 441 Gene3D - 98 139 - -
Car06g03298 441 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03298 Car-Chr6 61735687 61741453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03298 1 390 IQD Protein Family AT3G22190 55.696 4.78e-113 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03298 - - lang:109325503 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03298 06 61735687 61741453 Car06g03298 06 61735687 61741453 ECH