Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03269 ATGGCCATTAGATTTCCAGCTCAAGCAATAGGTGGAGCCATTGGTATCAAATCCATCCTTCAAGTGATTCCAACCCAATACAAAGATATGATGAAAGgttctggttATACAGGACCTTCTTTGAACCCTGCTAATGCTTTTGGATGGGCTTATCTCAATAATAAGCATAATACTTGGGAGCAATTTTATAGTCATTGTTCTAAATTGGGGTCAATGCAAAATCAAGATATTATACATTTGTTGAAGATTTGTCAAGAACACCAACAAAATTTGGTGACAAATATTTATTCTTTTTAA 297 0.33 MAIRFPAQAIGGAIGIKSILQVIPTQYKDMMKGSGYTGPSLNPANAFGWAYLNNKHNTWEQFYSHCSKLGSMQNQDIIHLLKICQEHQQNLVTNIYSF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03269 98 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 31 65 - -
Car06g03269 98 PANTHER AQUAPORIN SIP1-1 31 65 IPR044222 GO:0015250
Car06g03269 98 PANTHER AQUAPORIN SIP1-1 1 33 IPR044222 GO:0015250
Car06g03269 98 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03269 Car-Chr6 61140075 61141293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03269 30 65 Major Intrinsic Protein MIP AT3G04090 55.556 6.68e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03269 K09875 - fve:101294008 78.1814