Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03264 ATGGAAAAACAGCAGAAAAGTGAGGGAGAGGATGTGCTGCTGGTTGAACCAAAAGATGATAGTTTAGAGAAAGTTAATGATGTGGAGGCTGCACATGACCCAAAAAGTGATGCAGGGGATGTGTTGCAGGCTAAATCAAAAGATGAGTGTTCAAAGTTGCAAAACAAATGGCATAAAGAGCTTGGAAATGTGAAGAACGAGAAAGCAGTTGTGTATGCTACTGGTATTCACACCTTTTTCGGTAAAGGAACTAATTTGGTTGATAGTACTAACCAAGTTGGACATTTTCAAAAGGTGCTTACATCTATTGGAATGAATGTTCTTTGCAATGATAAACCTGGAACTCTCACTTTGAATAAACTTAGTGTTGATAAAAACTTGATTAAGGATGTTCCTAAAGAGAAAAGAGAGAGCAAGTTTGATTTTGAAGTAAATACATGTTGTTGGATTGGATGTGATTTGTGTTCTCATTGGACTCACACATATTGTGCTATTCGTGAGCAACATATTTGCATGGGTCCTTCTATAAAGAGAGGATCAAGGCCAAGCGAAATGGTTTTCAAGTGTCAAGCATGCAATAAGACATCAGCATTGTTGGTTGAGTTAAAGACGTCTTCCAACATTGTGCACCATCATGGGATAGGGGAACCTTGA 654 0.3838 MEKQQKSEGEDVLLVEPKDDSLEKVNDVEAAHDPKSDAGDVLQAKSKDECSKLQNKWHKELGNVKNEKAVVYATGIHTFFGKGTNLVDSTNQVGHFQKVLTSIGMNVLCNDKPGTLTLNKLSVDKNLIKDVPKEKRESKFDFEVNTCCWIGCDLCSHWTHTYCAIREQHICMGPSIKRGSRPSEMVFKCQACNKTSALLVELKTSSNIVHHHGIGEP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03264 217 Pfam PHD - plant homeodomain finger protein 138 204 IPR032881 -
Car06g03264 217 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 138 199 IPR004082 -
Car06g03264 217 Gene3D - 106 120 IPR023214 -
Car06g03264 217 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 65 80 IPR004082 -
Car06g03264 217 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 140 160 IPR004082 -
Car06g03264 217 CDD PHD_OBE1_like 138 192 - -
Car06g03264 217 Gene3D - 121 135 IPR023299 GO:0000166
Car06g03264 217 MobiDBLite consensus disorder prediction 1 23 - -
Car06g03264 217 PANTHER PROTEIN OBERON 2 138 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03264 Car-Chr6 60582724 60583879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03264 91 129 Primary Pumps ATPases AT2G18960 60.465 2.81e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03264 - - gmx:100803870 119.012