Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03239 ATGAGAATTTGTGGCGTGACATGTGTATTTTTGCATAATTGGTTGGAAGTTCGAAGAGCCCTTTTGACGATTAAACATTACATTATCCTTTTCCTAACCAGAAATAGTGACCCTTTTCGTTTCTTTATGAACATAAAGCTGGGACATGTGAGTATTGGTTCTTTACCATTGGACTTTAGTGGTGGACAACTTGCAGCTGGTGTTTCTTCACTTTTCTATGATGGAAATGGTTGTGGTGCTTGCTTTCGGGTAAGATGCAAGAACTAA 267 0.3858 MRICGVTCVFLHNWLEVRRALLTIKHYIILFLTRNSDPFRFFMNIKLGHVSIGSLPLDFSGGQLAAGVSSLFYDGNGCGACFRVRCKN 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03239 88 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 88 IPR007112 -
Car06g03239 88 Gene3D - 41 88 IPR036908 -
Car06g03239 88 SUPERFAMILY Barwin-like endoglucanases 30 87 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03239 53 88 Expansin Gene Family AT4G38400 55.556 4.88e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03239 - - ghi:107918466 62.003