Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03237 ATGTCTGAGTTTGACACAAACATCCCATCAACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACAAAAGAGTATGTTCATGTCCGCGTACAGCAGCGTAATGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTACAGCTATAGCAAGATACTCAAAGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCGAGGACCCTGAGTTGGGCCAGGTTATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAAGCTGGCATTGTAAAGAAGGAGAATATCAAGCTTCATGGTTTCTAA 342 0.4269 MSEFDTNIPSTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKLHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03237 113 MobiDBLite consensus disorder prediction 1 24 - -
Car06g03237 113 SUPERFAMILY eIF1-like 8 113 IPR036877 GO:0003743|GO:0006413
Car06g03237 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Car06g03237 113 Gene3D - 2 113 - -
Car06g03237 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Car06g03237 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Car06g03237 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 8 113 IPR005874 GO:0003743
Car06g03237 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Car06g03237 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Car06g03237 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03237 Car-Chr6 59978905 59979858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03237 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 87.611 9.84e-75 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03237 K03113 - gmx:100784390 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03237 06 59978905 59979858 Car06g03237 06 59978905 59979858 ECH