Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03228 ATGTGTAAAGGTACTAAAGAAGAGAAAAAGCGTGGTGGTTTTTGCAAGAGGTTCCCACCTAAAGATTTTGCTTCATTATGTGAAACAAAATCAAGTTCAAAATGTTGTGAGATTTGTGGATTGAAGGCTTCATTGTATTGCCAAGCTGATGATGCATATTTATGTAGAAAATGTGACAAATGGGTTCATAAAGCCAATTTTTTGGCACTTAGACATGTAAGGTGCTTTTTGTGCAACACGTGTCAGAATCTTACAAGAAGATGTCTTGTTGGAGCTTCATTAGAGGTTATACTTCCAACCACCATAGAAAACCTTATTCCTAACAATAATAGAAGAATCCAAAGAAATTGTTCAAGAAAACAGAACAGTACTACTCCATTTTTATTTATGTAG 393 0.3435 MCKGTKEEKKRGGFCKRFPPKDFASLCETKSSSKCCEICGLKASLYCQADDAYLCRKCDKWVHKANFLALRHVRCFLCNTCQNLTRRCLVGASLEVILPTTIENLIPNNNRRIQRNCSRKQNSTTPFLFM 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03228 130 CDD Bbox1_BBX-like 35 77 - -
Car06g03228 130 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 21 126 - -
Car06g03228 130 PANTHER B-BOX ZINC FINGER PROTEIN 29 21 126 - -
Car06g03228 130 SMART bboxneu5 31 77 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03228 Car-Chr6 59697008 59697785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03228 1 130 C2C2-CO-like Transcription Factor Family AT3G21890 44.776 3.07e-31 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car06g03228 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03228 - - gmx:100305571 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03228 06 59697008 59697785 Car06g03228 06 59697008 59697785 ECH
Car01g02325 01 49074165 49075081 Car06g03228 06 59697008 59697785 PCT