Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03217 ATGGAATTGTCAAGAACCGGTTGTGCCGTTGTTTATGCCATCCTTCTTTGTGCTTTGGCTCAAGGGGGCTCAGAAGGGAAGGAAGATGATGGGGATTTCTCATCTTTCCTTCATATTCATGGAAAACAGGCAGAAAATGTGTGGAAACATTGCAGGAAAGAATTGATAGAGAGGGACAATGATGATAAAGATTCTAACTTGCATCCACTTGAAGGAACCAACATTCACAAAACAACCAAATCATTGCCTCCAAATATGAAAAAAAAAGTCTTAGACTGCATAAGAACAAGTGCTGCTACTCCCCCTGCTCCTATTTCTGAACAAAGAGCTAATTCAAGATACTTGCTAACAAAACATTCTAGATCAACATTGAGTTTAAAAAGTGATCATCTTCATGGAACAAATTCAATTTCTGAGACACCACATAATCATATTtcaccaatctcaccaatattaccaatgtcaacaatgtcaccaatgtcacggatgtcaccaTCCCCTGATCATGCACTGGTATCACCAACTCAAGTTTcaacaccaacaacttcatcaccatcaccaacacctacacctacaccTGTTCCTAGTACTAACGTTGATTATTTACCACTCCCTCCAGATATGTTTATGCCATCACTACTGCAGTCGCATCAATCGGTCACTCCTTATCGTAATTTTCAACCTATAATGGATGCTCCGGTTCCTTCACCTTCTTATCACAGCAATAACAGAAGAAAGAAAACTATTATTTTAGCTGCTTCTGTGTCAGGAATCATAGTCTTAATAGGATTGTCACTTTGCTATCGTGAGGCTAAAAGCAATAAAGTTGAAAAAAATGACGGGTCTTTGCTCATATTAACCTCCAATGATTATGCCGGAGGTGCACCGAAGGTTATCCGTTTGGGAAGTACTACTAAAGAAGAATCTGATATCAACAAAGGAAAGAATCCTGCAGATGTTAGAAATTTGTCCATTAAAATTGGAGATAACAACACCACACTAGTTGAAACAACATTAGAAGATATAGGACAAGTACCAAGTACTTCTTCTGGAATACCGGCCcctccacctcctggtccgccaccacctcttcctcctcagccgcctgttcttgctcctcgtccacctgttcttgctcctcgtccaccaccacctccAAGAGCAGGTAATCCTCCGCCTGCTCCTCCCAAACCAATGGCTGGTAGAAACCAAATTACACCTCTTGGACCATTAAAACAAGGAGGTTCTAATGAGGGTGATGCTTCAAAGCCTAAACTAAAGCCATTTTTCTGGGAAAAGGTTAATGCAAAACCTGATCAATCAATGGTGTGGCATGAGATCAATGCCGGGTCGTTCGTGTTCGATGAAGAAATGATGGAGTCATTATTTGGTTGTACTACCAACCAAAACAAACATGAACGTAAAAAAGATTCACCTTCTGTAGATACTTCAGTACATTATATTCAGATTATTGACCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTCTGAATGTGACAACAGCAGAAGTTATTGATGCACTTAAAGAAGGTAATGAAATTCCTGTGGAGCTCATCCAAACGTTATTAAAAATGGCACCAACACAAGAAGAGGAACTAAAGCTTAGGTTATTCTCTGGAGAACTATCTCAATTAGGACCAGCAGAGAGGTTTCTCAAAGTATTAGTTGACATTCCATTTGCTTTCAAACGTCTTGAATCTCTCATGTTCATGTTTATTCTTCGAGAAGAGGTCTCAGGCATTAAGGATTCATTTGCAACATTAGAGGTTGCATGCAACAAGTTAAGAAAAAGCAGACTATTCTTAAAACTACTAGAAGCAGTTCTAAAAACCGGCAACCGAATGAACGACGGCACCTACCGCGGTGGCGCGCAAGCATTCCGTCTCGACACACTCTTAAAACTCTCCGACGTAAAAGGAACAGATGGAAAAACAACACTACTACACTTCGTTGTTCAAGAAATAATTCGTTCCGAAGGAATAAGAGCAGTAAGAACTGAAAGAGCAAGCAGAAGCATTTCAAGCGTAGGAACAGAAGACAATTTAGATTATGGAAATGAAGAATCAGAAGAACACTATCGTAGTCTTGGACTTCAAGTAGTTTCAAGTTTAAACAATGAACTTGCAGATGTTAAAAAAGCAGCATTAATTGATGGTGATGCATTGACTAACGCAGTTTTGAAACTCGGTCACTCGATGGTTAAGACTCAGGAGTTTTTGAACACTGATTTGAAGAATTTTAATGAAGAAGAAGAGAGTGATGAGTTTCAATGTTGTTTGGAGAAGTTTATGGAATATGCTAAAGGAGAAGTGACTTGGCTTGTTGAAGAAGAAAAGAGGATAATGGTTTTGGTTAAGAGTACTGCTGATTATTTTCATGGGAATGCAGGGAAAGATGAAGGATTGAAATTGTTTTTGATTGTGAGTGATTTTTTGATTATATTGGATAAGGTTTGTAAAGAGGTTAAGGAGGATACATTGAAGAGAATGAAAGATTCGTGTAAGAAAGAGGCGGGGAAAACGTCTTCCACGTCTTCGCCGGATACAcgtcatcatcagcagtcatctacttcgtcgtcgtcgtcgtcgccgccgCCACCATTGTCAGATCTACATAGGCGATTGTTTCCGGCTATTGCAGGGCGGAGAGTTGATTATTCTAGCTCTgacgatgaggaggatgaagaggaggagTTTTAG 2727 0.3469 MELSRTGCAVVYAILLCALAQGGSEGKEDDGDFSSFLHIHGKQAENVWKHCRKELIERDNDDKDSNLHPLEGTNIHKTTKSLPPNMKKKVLDCIRTSAATPPAPISEQRANSRYLLTKHSRSTLSLKSDHLHGTNSISETPHNHISPISPILPMSTMSPMSRMSPSPDHALVSPTQVSTPTTSSPSPTPTPTPVPSTNVDYLPLPPDMFMPSLLQSHQSVTPYRNFQPIMDAPVPSPSYHSNNRRKKTIILAASVSGIIVLIGLSLCYREAKSNKVEKNDGSLLILTSNDYAGGAPKVIRLGSTTKEESDINKGKNPADVRNLSIKIGDNNTTLVETTLEDIGQVPSTSSGIPAPPPPGPPPPLPPQPPVLAPRPPVLAPRPPPPPRAGNPPPAPPKPMAGRNQITPLGPLKQGGSNEGDASKPKLKPFFWEKVNAKPDQSMVWHEINAGSFVFDEEMMESLFGCTTNQNKHERKKDSPSVDTSVHYIQIIDPKKAQNLSILLRALNVTTAEVIDALKEGNEIPVELIQTLLKMAPTQEEELKLRLFSGELSQLGPAERFLKVLVDIPFAFKRLESLMFMFILREEVSGIKDSFATLEVACNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERASRSISSVGTEDNLDYGNEESEEHYRSLGLQVVSSLNNELADVKKAALIDGDALTNAVLKLGHSMVKTQEFLNTDLKNFNEEEESDEFQCCLEKFMEYAKGEVTWLVEEEKRIMVLVKSTADYFHGNAGKDEGLKLFLIVSDFLIILDKVCKEVKEDTLKRMKDSCKKEAGKTSSTSSPDTRHHQQSSTSSSSSSPPPPLSDLHRRLFPAIAGRRVDYSSSDDEEDEEEEF 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03217 908 MobiDBLite consensus disorder prediction 840 883 - -
Car06g03217 908 MobiDBLite consensus disorder prediction 848 876 - -
Car06g03217 908 Gene3D Formin, FH2 domain 424 864 IPR042201 -
Car06g03217 908 MobiDBLite consensus disorder prediction 125 201 - -
Car06g03217 908 PANTHER FORMIN-LIKE PROTEIN 1 903 - -
Car06g03217 908 PRINTS Proline rich extensin signature 179 191 - -
Car06g03217 908 PRINTS Proline rich extensin signature 345 362 - -
Car06g03217 908 PRINTS Proline rich extensin signature 373 398 - -
Car06g03217 908 ProSiteProfiles Formin homology-2 (FH2) domain profile. 416 850 IPR015425 -
Car06g03217 908 PANTHER FORMIN-RELATED 1 903 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car06g03217 908 SUPERFAMILY Formin homology 2 domain (FH2 domain) 429 835 - -
Car06g03217 908 SMART it6_source 416 839 IPR015425 -
Car06g03217 908 MobiDBLite consensus disorder prediction 350 400 - -
Car06g03217 908 MobiDBLite consensus disorder prediction 60 83 - -
Car06g03217 908 MobiDBLite consensus disorder prediction 184 200 - -
Car06g03217 908 MobiDBLite consensus disorder prediction 125 183 - -
Car06g03217 908 MobiDBLite consensus disorder prediction 344 424 - -
Car06g03217 908 Pfam Formin Homology 2 Domain 420 824 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03217 Car-Chr6 59358070 59363411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03217 409 850 FH2 protein (formin) Gene Family AT5G67470 45.291 7.69e-118 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03217 - - lja:Lj3g3v2888350.1 736.487