Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03208 ATGAGAACTGTTTTTCTTTTCTTCAACCTATTAGCTTCTTGGGTATTAGTATTCTCTTCTCCTTTGAATTTAGCAAGAGATACTTTGAACTATGGCCAGAAGTTAGTAGGCAATGAAACAATTGTTTCAGCTGGAAAAATATTTGAACTAGGCTTCTTTTCTCCAAACATCGCAGAAGGTTCAAAAAGATACTTAGGTATATGGTATCACATGCAAGATGTGTCAGAAAAACAAATAGTGGTTTGGGTTGCAAACAGAGACACTCCTGTAGATGTTGATTCCATTGGAGTTTTCCAAATAGCTGATGATGGGAATCTTGTAGTTGTTAACACATCTGGTAATAATAAACCCTACTGGTCATCCACTTCAAATTCTAATTCTTCACCAAAAAACAGGACTGTGAAACTCATGGATTCTGGTAACCTTGTGTTACAAGATGATGATGAACACAACAGAACGAAACTGTGGGAGAGCTTTGAAAATCCAACTGACACATTTCTTCCAGGCATGAATATGTATAATAATTTGAAGTTGAGCAGTTGGAGAAATGAAAACGATCCAGGAAGTGGAAATTTCAGTTTTGAGATGGAAAATGACAATAACCGTTTTATCATCCTAAACAGAACCCAAATTTATTGGGAGAGCGAAGAGTACAAGGCGTTGAATTTCAAATCAAAGTTTGATTCTACTTATGACGTCAGCGCAGAGGTTTTTAATTTGTTAAGCAACTTTAGTTCTCTTATACTGAGTAAACCATTTCCTACAAAACACTACGACAATACAAGATTGTTCCTCAATTCTAAAGGTGTGATACTGTGGGTGGACAATTTGAAACAAGGTGAGTTATCGGTTATGTGGAGGCAACCAAAAACCAATTGTTCAATTTATAATATTTGTGGAAACTTTACAAGTTGTAACGACAATGATAGGATGTGTAATTGTTTACCTGGATTCTACAATGATGACATGGGAGACAAGGTAGGTTGTAAGAGGAGAAACTCAGCATCGTGCAATGGAACGGATGACATGACATTCTTGAACTTGACTATGGTTAAAGTAGGAAGCCCAAACAAAAAATTCGCACTAAATGAAACTGATTGCAAGTCTTTATGCCTTCAGATGTGTCCACGGTGCCAGGCTTATTCATATGCTCCTCCTCCTCAGCAACGTGGTCTTAATCTTTCACCATGTTGGATCTGGACACATAATTTAACTACTCTTAAAGAAGACTATATTAATTGGGATAATCGTACACTTTATGTTCGAGTTCACAAATCAGACATAGCACCAACTCCAAGAAGTTGTGAGCCTTGCGGTACAAAGATAGTCCCATATCCGTTAAGTACTGGATCAAACTGTGGAGACATCACATACTTCAATTTCAGATGCATCACCTCAACTGGACAACTTACCTTCTTCAACACCACTACCGCCAACAACACCGTTAGTTACAAAGTTATTCGCGTAACGCCAAGTACAAGAAAATTTACCATTCAAAATGAGGATAATTCTTTTAATCCATATTGTGAATCTAAACTCCATCAAAATCTTATAGTTTCTTCACCGTTTCGCTTGACTAATGACAATCCTTGCTCCGAACAAGTAGATATTAGTTGGGAACCACCTTCTAAAGAACCCAAATGTGCTAATCCCGTTGACTGCATTGGTTGGAAATACTCTACTTGTAGCAAAGGAAACAAGTGTGTTTGCAATCAAAACTATTACTGGAGTGGCGAGAATTTAACTTGTAACGAAAACCTTAGATTCTCTCCTAATACTCCAAAAAAGACAATAAAAGGGAACTCCAAAAGTCGATTCACTTTGATTCTTTGCTTAACTCTTATTGGCGTGGTAACTTTGATCTGCATCATTATTTTTAGTTATGCATGTAGACGGAGAATAGCTCATATGGTTAGGCAAGAAAAGGAAAGCATACAAAGAAATATGAGAGGGAGATTTTATGACAGTGAAAGACATGTGAAGGACATTATAGACATGGAAGGATTGGATGAGAAAGACATTGAAGGAATAGAAGTTCCCTATTTTGATTTTGAGAGCATACTGAGGGCCACAAATGACTTTTCAGATGCAAACAAACTTGGAAGAGGTGGTTATGGGCCAGTTTACAAGGGTAAGCTTGACGATGGTCAAGAAGTTGCAGTAAAGAGACTTTCAAGTGTTTCATCACAAGGCTTACAAGAATTCAAGAATGAAGTTGTTTTGATAGCCAAACTTCAACATCGTAACTTGGTTAGATTACGAGGCTATTGCGTGAAAGGAGAAGAAAAAATTCTACTCTATGAATATATGCTCAACAAGAGTTTGGACTTATTTATATTTGATTCGACAAAAAGCGTAATTTTGGATTGGCAAATGCGGTTTGACATAATTCTTGGAATTGCTCGTGGACTACTTTATCTTCATCAAGACTCAAGATTGAGAGTTATTCATCGAGATTTGAAAACCAGCAACATTCTTTTAGATGGGGAGATGCAACCAAAAATTTCAGATTTTGGATTGGCAAGAATATTTGGAGGCAAGGAAATAGAGGCAAACACAGAGAGGGTTGTTGGGACATATGGATACATGTCTCCTGAGTATGCACTCGATGGAAATTTCTCAACAAAATCAGATATTTTTAGTTTTGGAGTTGTCTTGCTCGAGATCATCAGTGGAAAAAAGAACACGGGATTTTATCGGTCTAAAGAAATTTCAAGCCTTTTGGGTTATGCCTGGAGTCTATGGAAAGAGGACAAATTGCAAGAATTAATGGACTTATCTCTATATGATACTTATAATGAAAATCAGTTTATTAAGTGTTCACAAATTGGACTCTTATGTGTACAAGATGAGCCGGATGATCGACCAAACATGTCAAATGTGTTGACAATGCTAGACAATGATACTATAACCCTCCCAACCCCTAAACAACCAACCTTTTTTATGCGTAAAGATTTATCAAGCACAGCTTCTTCAAGTATGCAGTGTGACAGTATCATTCAAGAAGGTCGATAG 3015 0.3701 MRTVFLFFNLLASWVLVFSSPLNLARDTLNYGQKLVGNETIVSAGKIFELGFFSPNIAEGSKRYLGIWYHMQDVSEKQIVVWVANRDTPVDVDSIGVFQIADDGNLVVVNTSGNNKPYWSSTSNSNSSPKNRTVKLMDSGNLVLQDDDEHNRTKLWESFENPTDTFLPGMNMYNNLKLSSWRNENDPGSGNFSFEMENDNNRFIILNRTQIYWESEEYKALNFKSKFDSTYDVSAEVFNLLSNFSSLILSKPFPTKHYDNTRLFLNSKGVILWVDNLKQGELSVMWRQPKTNCSIYNICGNFTSCNDNDRMCNCLPGFYNDDMGDKVGCKRRNSASCNGTDDMTFLNLTMVKVGSPNKKFALNETDCKSLCLQMCPRCQAYSYAPPPQQRGLNLSPCWIWTHNLTTLKEDYINWDNRTLYVRVHKSDIAPTPRSCEPCGTKIVPYPLSTGSNCGDITYFNFRCITSTGQLTFFNTTTANNTVSYKVIRVTPSTRKFTIQNEDNSFNPYCESKLHQNLIVSSPFRLTNDNPCSEQVDISWEPPSKEPKCANPVDCIGWKYSTCSKGNKCVCNQNYYWSGENLTCNENLRFSPNTPKKTIKGNSKSRFTLILCLTLIGVVTLICIIIFSYACRRRIAHMVRQEKESIQRNMRGRFYDSERHVKDIIDMEGLDEKDIEGIEVPYFDFESILRATNDFSDANKLGRGGYGPVYKGKLDDGQEVAVKRLSSVSSQGLQEFKNEVVLIAKLQHRNLVRLRGYCVKGEEKILLYEYMLNKSLDLFIFDSTKSVILDWQMRFDIILGIARGLLYLHQDSRLRVIHRDLKTSNILLDGEMQPKISDFGLARIFGGKEIEANTERVVGTYGYMSPEYALDGNFSTKSDIFSFGVVLLEIISGKKNTGFYRSKEISSLLGYAWSLWKEDKLQELMDLSLYDTYNENQFIKCSQIGLLCVQDEPDDRPNMSNVLTMLDNDTITLPTPKQPTFFMRKDLSSTASSSMQCDSIIQEGR 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03208 1004 CDD STKc_IRAK 700 967 - -
Car06g03208 1004 SMART blect_4 32 162 IPR001480 -
Car06g03208 1004 Gene3D - 21 160 IPR036426 -
Car06g03208 1004 ProSiteProfiles PAN/Apple domain profile. 337 424 IPR003609 -
Car06g03208 1004 Gene3D Phosphorylase Kinase; domain 1 660 769 - -
Car06g03208 1004 Pfam D-mannose binding lectin 80 177 IPR001480 -
Car06g03208 1004 Pfam Protein kinase domain 695 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03208 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Car06g03208 1004 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 994 - -
Car06g03208 1004 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 994 - -
Car06g03208 1004 Gene3D Transferase(Phosphotransferase) domain 1 770 973 - -
Car06g03208 1004 CDD B_lectin 35 162 IPR001480 -
Car06g03208 1004 SMART serkin_6 694 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03208 1004 ProSiteProfiles Protein kinase domain profile. 694 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03208 1004 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 217 IPR036426 -
Car06g03208 1004 SUPERFAMILY Protein kinase-like (PK-like) 678 986 IPR011009 -
Car06g03208 1004 Pfam S-locus glycoprotein domain 252 319 IPR000858 GO:0048544
Car06g03208 1004 ProSiteProfiles Bulb-type lectin domain profile. 26 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03208 Car-Chr6 59256980 59262674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03208 592 983 Receptor kinase-like Gene Family AT4G05200 49.235 5.54e-126 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g03208 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03208 - - mtr:MTR_0148s0080 1344.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03208 06 59256980 59262674 Car06g03208 06 59256980 59262674 ECH