Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03202 ATGGTGAGAATCCCATCTAGTGACAAAATTGTTTTGAAGAGAGGAACATGGACACAAGAGGAAGACAAGAAGTTAATTGACTATGTTACTAGATATGGTCACTGGAATTGGCGCCTACTCCCTAAGTTTGCAGGACTTGCGAGATGCGGAAAGAGTTGTAGATTAAGGTGGCTAAATTACCTAAGCCCAAATCTCAAAAGGGGGAACTTCACTTTAGAAGAGGAGGAAACTATTGTTAAACTGAATCAACTTCTAGGTAACAGaactcaagactatttgctccaatag 288 0.3681 MVRIPSSDKIVLKRGTWTQEEDKKLIDYVTRYGHWNWRLLPKFAGLARCGKSCRLRWLNYLSPNLKRGNFTLEEEETIVKLNQLLGNRTQDYLLQ 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03202 95 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car06g03202 95 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 88 - -
Car06g03202 95 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Car06g03202 95 SMART sant 13 63 IPR001005 -
Car06g03202 95 Gene3D - 13 66 - -
Car06g03202 95 CDD SANT 16 61 IPR001005 -
Car06g03202 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 88 - -
Car06g03202 95 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Car06g03202 95 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03202 Car-Chr6 59156508 59159924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03202 1 88 MYB Transcription Factor Family AT1G06180 64.773 1.53e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car06g03202 Myb_DNA-binding 7.1e-15 CL0123