Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03199 ATGGTAAGAGCTCCTTATTTTGACGAAAATGGAATAAAGAAAGGTGCATGGAGTGAAGAAGAAGATCATAAGCTTATTGCTTACATTGAGAGACACGGTCATCCTAATTGGCGTCAACTTCCTAAGTATGCAGGTTTGTCAAGATGTGGAAAGAGTTGTAGGCTCCGTTGGATGAATTACCTGCGGCCAAATCTAAAACGAGGGAAGTATACACCGATGGAAGAACAAATGATCATGGAATTGCATAAAAAGCATGGAAATAAATGGTCTATGATTGCTGAAAATCTAGTTGGAAGAACGGACAACGAGATAAAGAATTATTGGCATAGTCACCTAAAAAGATTCTCAAAGCACAATGAGACCAACTTTGGTGAGGAGACTGAAAAGACAAAAAAGATATGTGATAGTGTTAGTGGTGATTCCCACCACATTTTGGAAAGTTCACTTTCAATGTCCTCTGAAATTTCCTACACAACTACTCAAGGAAACTCTCCATCAATTTCATCAGAATTTAATCACGTAGTGGAATCAAACGTGAACTTGTATAGAAAAGAAGATAGCGTTGCTTCGTGGGAAACATTGGATGGATTTAGCAACAATTTTTGGACAGAACCGTTTGTTTTAGAAAGTGCTTTGAGTCAGGATTGCTTTCCCATTTCATTTTATTGTGGAGTAGAGGCAGAAGATCCTTTTTTTTATGAGACACTTAAATTAAAATTTGATTAA 726 0.3691 MVRAPYFDENGIKKGAWSEEEDHKLIAYIERHGHPNWRQLPKYAGLSRCGKSCRLRWMNYLRPNLKRGKYTPMEEQMIMELHKKHGNKWSMIAENLVGRTDNEIKNYWHSHLKRFSKHNETNFGEETEKTKKICDSVSGDSHHILESSLSMSSEISYTTTQGNSPSISSEFNHVVESNVNLYRKEDSVASWETLDGFSNNFWTEPFVLESALSQDCFPISFYCGVEAEDPFFYETLKLKFD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03199 241 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car06g03199 241 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car06g03199 241 CDD SANT 69 112 IPR001005 -
Car06g03199 241 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Car06g03199 241 CDD SANT 16 61 IPR001005 -
Car06g03199 241 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Car06g03199 241 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car06g03199 241 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 224 - -
Car06g03199 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Car06g03199 241 Gene3D - 7 67 - -
Car06g03199 241 PANTHER MYB TRANSCRIPTION FACTOR 1 224 - -
Car06g03199 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Car06g03199 241 Gene3D - 68 137 - -
Car06g03199 241 SMART sant 66 114 IPR001005 -
Car06g03199 241 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03199 Car-Chr6 58946314 58948756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03199 1 213 MYB Transcription Factor Family AT1G06180 44.131 1.42e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car06g03199 Myb_DNA-binding 9.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03199 K09422 - gmx:100781032 313.923