Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g03187 | ATGCAGAATATTGAAGAGAAGCCACATATGCCTTCATCTTCTTTCCGAAGGCGCACTGTCTATCCAGAAACCTTCTCTTTTCCGGACACTGATCCTGACATTTTCACAGCATGCTCTCTTGGAACTGCAGCGCACCCTCGCCATATCAGAGATCCTTCTTCTGATGATTTTTCTGAGATAATGGTGCTTCAAGGAAGCATACTAATGGGAGGACGGCGTGACCTTTTCCGAGACTGGAGACTAGATGTTGATAACATGTCATATGAGCAATTGCTTGAGCTTGGCGAGAGAATTGGTAATGTCAATACAGGACTTAAAGAAGATGAGATGGAACCTTACATAACGAAGACTAAGCTTCAGATTTCGGATCAAGTAGACAAAAAGTGCAGCATTTGTCAGGAAGAGTATGAAGAAGATGATAAACTTGGGAGGCTTAACTGTGATCACTTGTATCACTTTCAATGTATACAACAATGGGTTGCACACAAAAATTGCTGCCCTGTGTGTAAGCACCAGGTTGCAGCACGACGCTGA | 534 | 0.4326 | MQNIEEKPHMPSSSFRRRTVYPETFSFPDTDPDIFTACSLGTAAHPRHIRDPSSDDFSEIMVLQGSILMGGRRDLFRDWRLDVDNMSYEQLLELGERIGNVNTGLKEDEMEPYITKTKLQISDQVDKKCSICQEEYEEDDKLGRLNCDHLYHFQCIQQWVAHKNCCPVCKHQVAARR | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g03187 | 177 | ProSiteProfiles | Zinc finger RING-type profile. | 129 | 170 | IPR001841 | - | |
Car06g03187 | 177 | SUPERFAMILY | RING/U-box | 110 | 174 | - | - | |
Car06g03187 | 177 | Pfam | Ring finger domain | 128 | 170 | IPR001841 | - | |
Car06g03187 | 177 | PANTHER | C3HC4-TYPE RING ZINC FINGER PROTEIN | 11 | 176 | - | - | |
Car06g03187 | 177 | SMART | ring_2 | 129 | 169 | IPR001841 | - | |
Car06g03187 | 177 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 98 | 175 | IPR013083 | - | |
Car06g03187 | 177 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 11 | 176 | IPR045191 | GO:0061630 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car06g03187 | Car-Chr6 | 58745017 | 58747567 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car06g03187 | 61 | 172 | C3H Transcription Factor Family | AT2G15530 | 47.899 | 1.35e-27 | 106 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g03187 | - | - | cam:101488798 | 355.525 |