Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03184 ATGACAATTGCTTCCTTCTTCACCAGAGCCTCCAGGGCTCTCAAAAGTACTTCCCCTTTCTGCTCCAACTTTCTGCTTCTCTGCGCTTTAAGTGGTGGAGGTGTGGTGGCACTCTCAGAATCACAATCAGAAGCCCAACATCCTAAAATTGAAGATCGTGAGCCCCGGAAAAAGAAAGTTGTGGTCCTTGGAACTGGATGGGGTGCTACTAGTTTTCTTAAGGGTTTGGATGCTTCATTATATGATGTTCAGGTTGTTTCGCCTCGTAATTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGCGGGACAGTTGAAGCACGGAGCATCGTAGAACCGGTCCGAAACATTATTAAAAAGACTAATGGAGAAATAAAATTTTGGGAAGCAGAATGCATTAAGATTGATGCTGCAGACAAAAAGGTTTTATGTCGGTGTAATATTGAAAACTTAGTGGGAAGTGGTGAATTTTCTCTGGATTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTTAATACTTTTAATACCCCTGGTGTCAAGGAGAACTGTCATTTTCTCAAGGACGTCGAGGACGCTCAGAAGATCAGACTGTCTGTAATAGATTGTCTTGAGAAGGCTGTTCTTCCTAGTCAATCTGAAGAGGAGCAAAGGTCAAATCTTCATTTTGTAGTCGTTGGAGGAGGTCCAACTGGTGTTGAATTTGCTGCAGAGCTGCATGATTATATCCAAGAAGACTTGATCAAATTATATCCTTCTGTTAAAGATAAAGTGAAGATAACGTTAATTCAATCTGGCGATCACATCTTGAACATGTTCGATGAAAGAATAAGTTCATTTGCTGAGCAGAAGTTTACGAGAGATGGTATAGAAGTTCAAACCGGATGCCGGGTTTTGAGTGTTAATGACCAAGAAATTACAATGAAGGTGAAATCAACGGGATCGGTTTGTTCTGTTCCCCATGGATTGATTGTCTGGTCCACTGGCATTTGTACTGTTCCAGTTATAAGGGACTTTATGCAAGAAATTGGTCAGGCTAAGAGGCATGTACTAGCAACTAATGAATGGTTGCGAGTAGAAGGATGTGAAAATGTGTATGCCATTGGTGACTGTTCATCAATAAATCAACGTAAAATCAAGGATGATATCATCGACATATTTAAGGCTGCAGACAAAAACAACTCCGGTACTTTAACCATAGAAGAATTCCAAGAAGTGATGGATGACATAATTGTAAGATATCCTCAAGTTGAATACTATCTAAAGAAGAAAAACATACTTGATTTGAGGGTTCTGTGGAACGACCCGCAAGGAAATGAAAGAGAAGAAATAGACATAGAAGGGTTTAAGCTAGCCCTTTCTCTTGCAGATTCACAGGTGAAGAGTCTTCCAGCAACTGCACAGGTTGCTGCACAACAAGGTGCTTATCTAGCTAATTGCTTTAACCGCATTGATCATATTGAAGAGCATCCAGAAGGACCACGACGATTTACAGGATCTGGACATCATAACTTTCGTCCTTTCAGGTATAAACATTTTGGGCAATTTGCTCCACTTGGTGGGGAGCAGGCAGCAGCAGAACTTCCTGGAGACTGGGTTTCCATTGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGCACAAGGTATTTGGTCGTGTCTGATTGGACTAGAAGATTCATATTTGGGAGGGATTCAAGTCGAGTTTAA 1737 0.4139 MTIASFFTRASRALKSTSPFCSNFLLLCALSGGGVVALSESQSEAQHPKIEDREPRKKKVVVLGTGWGATSFLKGLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKTNGEIKFWEAECIKIDAADKKVLCRCNIENLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCLEKAVLPSQSEEEQRSNLHFVVVGGGPTGVEFAAELHDYIQEDLIKLYPSVKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVQTGCRVLSVNDQEITMKVKSTGSVCSVPHGLIVWSTGICTVPVIRDFMQEIGQAKRHVLATNEWLRVEGCENVYAIGDCSSINQRKIKDDIIDIFKAADKNNSGTLTIEEFQEVMDDIIVRYPQVEYYLKKKNILDLRVLWNDPQGNEREEIDIEGFKLALSLADSQVKSLPATAQVAAQQGAYLANCFNRIDHIEEHPEGPRRFTGSGHHNFRPFRYKHFGQFAPLGGEQAAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRYLVVSDWTRRFIFGRDSSRV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03184 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 376 IPR023753 GO:0016491
Car06g03184 578 PANTHER NADH DEHYDROGENASE 54 578 IPR045024 GO:0003954|GO:0006116
Car06g03184 578 SUPERFAMILY FAD/NAD(P)-binding domain 222 376 IPR036188 -
Car06g03184 578 ProSiteProfiles EF-hand calcium-binding domain profile. 379 414 IPR002048 GO:0005509
Car06g03184 578 ProSitePatterns EF-hand calcium-binding domain. 392 404 IPR018247 -
Car06g03184 578 Gene3D - 47 410 - -
Car06g03184 578 Gene3D - 437 578 - -
Car06g03184 578 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 54 578 - -
Car06g03184 578 SUPERFAMILY EF-hand 337 462 IPR011992 -
Car06g03184 578 SMART efh_1 383 411 IPR002048 GO:0005509
Car06g03184 578 Pfam EF hand 384 409 IPR002048 GO:0005509
Car06g03184 578 SUPERFAMILY FAD/NAD(P)-binding domain 57 275 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03184 Car-Chr6 58698742 58704663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03184 1 578 Chloroplast and Mitochondria Gene Families AT4G21490 62.950 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03184 K03885 - gmx:100793566 984.171