Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03174 ATGGATTGGAAGAGATCTACTTTGAAGTTCAAGACAGTTAAGATCTATGGAGATGTTCTATTGGGATTTTTGTTGATTTGCATAATTCAGATTTCAAGTGCTGTCACTGATCCCACTGATGTTGCTGCACTTAATAGCTTATATGCTTCACTGGGATCTCCTCCTCTCCCTGGATGGGTTGCTAGTGGCGGAGATCCATGCGGAGAAGGGTGGCAAGGCATTCAGTGTAATGGTTCGTTCATTCAAAAAATTGTTCTGAATGGTGCAAATTTGGGAGGAGAACTGGGCGATAATCTGGCAACATTTGTTACAATCTCAGTAATCGATCTGAGCAACAACAACATTGGAGGAAGCATTCCATCCAATTTGCCAGTTACCATGAGAAACTTTTTTCTTTCAGCCAACCTGTTCACTGGAAGTATTCCAGCCTCTTTATCCACTTTAATTGGAATGACAGACATGTCTCTGAACAACAATCATTTAACTGGAGAAATACCAGATGCGTTTCAGTCACTTACGCAATTGATCAATTTAGATTTATCTAGTAATAATCTGAGCGGGGAACTACCTCCTTCAGTGGAGAACCTGTCATCCTTGACCACCCTGCGCTTGCAGGATAATCAACTATCCGGGACACTTGATGTTTTACAAGATCTTCCTCTGAAAGATTTGAATGTCGAGAACAACCAATTTGCTGGCCCAATACCTCCAAAGTTGCTAAACATTCCTACGTTCAGACAAGCTGGAAATCCATTTAATGATAATGCCACGGCACCAAGTGCTCCTCCACCTGGCTCTCAAGTACCACCACCACCAGGAGCACCGGTTTCTGGAGCACCATCTTCTGTTAATGGAGTACCATCTTCTGTTAATGGAGTACCATCttctggttctggagtaccatcttctggttctggttctggttctggCCGTGTACCTACCAAACAAGCTGATGGACCTACTGTAGCGACTGAATCAAAATTTGGGAGATCCAAAAAACATACCAAAAGGGTGGTTTTGATATCTATTGCAAGTGTATTGGTATTCGTTATTTTTGTACTAGCACTCGTTTTATTTGTTCCAAGATGTGGTAGAAGGGAACGGGTTGACAGAAGGTCCAGGCAACGTCAAATCGGTGCATATGGAGGTGAAAGACAAAATGCTAGAGATTACGAAGCTGTTGTTGTCCAACCACCTATTGGAACAGAAAAAGTACCACCAACAGTGGATGTTTTGAGGCCAAAAGATGATCACCAAGAAGAGCCTAGGAGAGTTTGGGCTGTTCCAAATGCACAGGATAAGCAAGAGAAGGATGTGCAAAGAATGGTGGCAATACCAAAGTCGAGAGATCAGGAAATAGATATCAGTACACCAGAAGTGTATTCTATGcctcttccacctccacctccgccaccacctccacctccacctccaccgtcaccaccaccaccaccacctcctcctcatcctcttcctactAAGAGGGTGATCGCTGAGCCAACCACTTCCCACAGAGTGACTAATGTCAATCCATCCTTAAGAAGTTCAATTCTTCCTCCCACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGAGCAGAGCTTCCTGATGGGAAGCTACTTGCTGTAAAGAAATTTGACAAAAGAGCCTCTACTCACCATAAGGACGATGAGTTTCTTGAATTAGTAAACAATATTGACAGAATAAGACATTCAAATATTGTTGAGCTTATTGGATACTGTTCAGAACATGGTCAAAGGCTTCTGATCTTCGAGTACTGCAGTAACGGATCACTATATGATGCACTTCACTCGGATGAGGAATTGAAAGCAGCACTATCATGGAATACTCGCATTCGGATAGCACTTGGGGCAGCTAGAGCCTTAGAATATTTGCATGAGCAATGTCAGCCACCTGTGATACACAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGAAGATCTATCAGTGCGTCTATCTGATTGTGGTTTAGCTCCATTAATAGCTTCGGGATCTGTAAGTCAGCTCTCGGGGAACCTGCAATCAACTTACGGCTATGGAGCTCCAGAATTTGAGTTAGGAACTTACAATTACCAAAGTGACATATACACCTTTGGAGTGATTATGTTAGAACTTTTGACTGGCCGTCAGTCTCACGACAGGACACGTCCACGAGGGGAGCAATTTCTTGCTAGATGGGCAATTCCTAAACTTCATGATATTGATGCACTATCAAAAATGGTTGATCCTTCTTTAAATGGAGTTTTCCCTGCAAAGTCGTTGTCAAATTTTGCAGACATTATTTCTCGATGCCTTCAGTTGGAGCCAGAATATAGACCGGCAATGTCTGAGGTCGTCCTATACTTACTAAATATGATAAAGAGGGAGTCTGAGGCAAGTGATTCAAATGAAAAATAA 2487 0.3961 MDWKRSTLKFKTVKIYGDVLLGFLLICIIQISSAVTDPTDVAALNSLYASLGSPPLPGWVASGGDPCGEGWQGIQCNGSFIQKIVLNGANLGGELGDNLATFVTISVIDLSNNNIGGSIPSNLPVTMRNFFLSANLFTGSIPASLSTLIGMTDMSLNNNHLTGEIPDAFQSLTQLINLDLSSNNLSGELPPSVENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFAGPIPPKLLNIPTFRQAGNPFNDNATAPSAPPPGSQVPPPPGAPVSGAPSSVNGVPSSVNGVPSSGSGVPSSGSGSGSGRVPTKQADGPTVATESKFGRSKKHTKRVVLISIASVLVFVIFVLALVLFVPRCGRRERVDRRSRQRQIGAYGGERQNARDYEAVVVQPPIGTEKVPPTVDVLRPKDDHQEEPRRVWAVPNAQDKQEKDVQRMVAIPKSRDQEIDISTPEVYSMPLPPPPPPPPPPPPPPSPPPPPPPPHPLPTKRVIAEPTTSHRVTNVNPSLRSSILPPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPDGKLLAVKKFDKRASTHHKDDEFLELVNNIDRIRHSNIVELIGYCSEHGQRLLIFEYCSNGSLYDALHSDEELKAALSWNTRIRIALGAARALEYLHEQCQPPVIHRNLKSANILLDEDLSVRLSDCGLAPLIASGSVSQLSGNLQSTYGYGAPEFELGTYNYQSDIYTFGVIMLELLTGRQSHDRTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVFPAKSLSNFADIISRCLQLEPEYRPAMSEVVLYLLNMIKRESEASDSNEK 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03174 828 Gene3D Transferase(Phosphotransferase) domain 1 616 828 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 459 495 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 461 494 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 405 439 - -
Car06g03174 828 Gene3D Ribonuclease Inhibitor 36 257 IPR032675 -
Car06g03174 828 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 827 - -
Car06g03174 828 Gene3D Phosphorylase Kinase; domain 1 501 615 - -
Car06g03174 828 Pfam Protein tyrosine and serine/threonine kinase 541 810 IPR001245 GO:0004672|GO:0006468
Car06g03174 828 PANTHER OS01G0253100 PROTEIN 25 827 IPR045271 GO:0004714|GO:0006468
Car06g03174 828 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Car06g03174 828 SUPERFAMILY L domain-like 36 244 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 281 314 - -
Car06g03174 828 ProSiteProfiles Protein kinase domain profile. 538 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03174 828 SUPERFAMILY Protein kinase-like (PK-like) 514 812 IPR011009 -
Car06g03174 828 MobiDBLite consensus disorder prediction 409 424 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 246 261 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 262 277 - -
Car06g03174 828 MobiDBLite consensus disorder prediction 233 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03174 Car-Chr6 58378432 58387056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03174 26 823 Strubbelig Receptor Gene Family AT4G03390 56.737 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Car06g03174 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03174 - - mtr:MTR_4g046113 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02373 01 49518492 49526694 Car06g03174 06 58378432 58387056 PCT