Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03166 ATGGGTTGTTGTGTTTCAACGAGTAGTCGAAGTACTTGTAGCAGCGGGAGTAATGGAGAGATGGTCACTACTCCATCTTGCTTAGAAATTGGGTTCTGTGGGAAAAAGAGAGCAAGGAGAACATTCTCTGACCATGTTATTTCGTTACAACATTTATCATCCTTACCTAGCAGGATTTTCACAAACGGAAAGAGTCGAGGTTCTTGCATATTTACGCAGCAAGGCCGCAAGGGCATTAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCTGAAGATACGGTCTTTTGTGGTGTCTTTGATGGCCATGGTCCACATGGTCATCTTGTTGCACGGAAAGTGAGGGATACTTTACCTGTAAAATTGCTTTCATTTTTGCATTCTAGTGAATCAAAGCAAAATAGGTCAGGTAAAGCTTGTTTCAAACAGAACATAAAACGGGATGGTGGAGACTCTGAGAAGGATTGTTCTGCTGAGGATAAACTGAATTCGACTTGGAGAGAAGCTTTCATGAAAACATACAAGGCCATGGACAAAGAGCTTCGGTCTCATCCAAATGTAGACTGCTTCTGTAGTGGGAGCACAGCTGTGACTATAGTGAAGCAGGGTTTAAATCTGTTCATGGGATATATCGGGGATTCGCGAGCAATTATGGGATCCAAAGACAGCAATGATGCCATGGTGGCAGTTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGAGAAGCGGAAAGAATCAAGCAGTGCAAGGGGAGGGTGTTCGCGTTGCAAGATGAGCCGGAAGTGCCTAGGGTTTGGTTGCCTTTTGATGATGCACCGGGATTAGCAATGGCCAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACTGACAGAGATCAATTCATTGTTCTTGCCTCTGACGGGGTTTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCCTCAGCACCAACACGATCATCAGCAGCAAGGATTGTGGTAAATTCTGCTGCTCGGGAATGGAAACTCAAATACCCAACTTCGAAGATGGACGACTGTGCTGTAGTGTGCTTATTTTTGGATGGTAAAATGGACTCAGAATCAGATTATGAAGAACAAGGTTTCTCTTCTGCCACCATTCAGAGCAACCATTCAGGGAATCCAATTGAGTCAGACGATGGACAAAAGTCTGAGCCGTCTTTGCAAAGGAACTTTACGGTAAGATCATCCGAAGAAAATGAGATTAATGGAGCAGTGTCTGTTGATGTTGAAGATGTAACAGCATCAGCTGATGATCAAAACTGGTCAGGTTTAGAAGGGGTCACCCGCGTAAACTCACTCGTCCAACTTCCTAGATTTTCTGAGGAAAGGTCAAACTCTTGA 1416 0.44 MGCCVSTSSRSTCSSGSNGEMVTTPSCLEIGFCGKKRARRTFSDHVISLQHLSSLPSRIFTNGKSRGSCIFTQQGRKGINQDAMVVWEDFMSEDTVFCGVFDGHGPHGHLVARKVRDTLPVKLLSFLHSSESKQNRSGKACFKQNIKRDGGDSEKDCSAEDKLNSTWREAFMKTYKAMDKELRSHPNVDCFCSGSTAVTIVKQGLNLFMGYIGDSRAIMGSKDSNDAMVAVQLTVDLKPDLPREAERIKQCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARIVVNSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENEINGAVSVDVEDVTASADDQNWSGLEGVTRVNSLVQLPRFSEERSNS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03166 471 ProSiteProfiles PPM-type phosphatase domain profile. 67 371 IPR001932 -
Car06g03166 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Car06g03166 471 MobiDBLite consensus disorder prediction 1 20 - -
Car06g03166 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Car06g03166 471 Pfam Protein phosphatase 2C 93 338 IPR001932 -
Car06g03166 471 MobiDBLite consensus disorder prediction 382 427 - -
Car06g03166 471 SMART PP2C_4 51 369 IPR001932 -
Car06g03166 471 CDD PP2Cc 66 371 IPR001932 -
Car06g03166 471 MobiDBLite consensus disorder prediction 381 430 - -
Car06g03166 471 Gene3D - 64 379 IPR036457 -
Car06g03166 471 SUPERFAMILY PP2C-like 58 373 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03166 Car-Chr6 58091657 58096561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03166 1 467 PP2C-type Phosphatase Gene Family AT1G03590 69.831 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03166 - - gmx:100798340 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02380 01 49563432 49567530 Car06g03166 06 58091657 58096561 PCT