Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03157 ATGAATAGCAGTGGTGGCAGTAACGGAGGGATGATGATGGGTTTCAGTAGTAATAAGTCACCTTTCACAGTTTCTCAGTGGCAGGAACTTGAACATCAAGCTTTGATCTTTAAGTATATGGTTGCTGGTCTTCCTGTTCCACCTGATCTTGTTCTTCCTATTCAAAGAAGTTTTGACTCTATTTCTCATAATTTCTTTCATCATCCTACTTTGAGTTATTGTTCCTTTTATGGGAAGAAGGTGGACCCGGAGCCGGGACGATGTAGGAGGACTGACGGAAAAAAGTGGAGGTGCTCAAAGGAAGCATACCCGGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCACTGACTGCCACTGGTGGCAGCAGCAGCAGCCGAGCTGGAGATTTCCAGATCCTTCCTGCAAATAATGCCTTTGGCAGTCTTCAAAATACTGCCGCTTCTGGAACCGACCGTGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTATCTTCAAGGTCTTAAATCTGAGGGTGGAGAACATAGCTTCTTTGCTGAAGCATCAGGAGGCAACAAGGGTCTCCAAATGGAGTCACAGCTGGAAAACACATGGTCGTTGATGTCAACAAGAGTTTCCTCCTTTTCCGCATCAAAATCAAGTAATAATTCCATGTTGCAGAATAGTTATCCTCAGCATTCATTTTTATCTAATGAATATGCATCTGGAGAAGCTGTGAAGGAAGAGGGCCAGCCTCTTCGACCCTTTTTCAATGAATGGCCTAAGAGCCGGGATTCATGGTCCGGTTTGGAAGACGAGAGATCCAACCAAACAGCCTTCTCCACAACTCAACTCTCAATATCCATTCCTATGTCATCTTCCGACTTCTCTGCCACGAGCTCTCAATCGCCGCACGATAACTAG 993 0.4582 MNSSGGSNGGMMMGFSSNKSPFTVSQWQELEHQALIFKYMVAGLPVPPDLVLPIQRSFDSISHNFFHHPTLSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTATGGSSSSRAGDFQILPANNAFGSLQNTAASGTDRADYHLDTIPYGIPSKEYRYLQGLKSEGGEHSFFAEASGGNKGLQMESQLENTWSLMSTRVSSFSASKSSNNSMLQNSYPQHSFLSNEYASGEAVKEEGQPLRPFFNEWPKSRDSWSGLEDERSNQTAFSTTQLSISIPMSSSDFSATSSQSPHDN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03157 330 ProSiteProfiles QLQ domain profile. 21 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car06g03157 330 ProSiteProfiles WRC domain profile. 82 126 IPR014977 -
Car06g03157 330 Pfam QLQ 21 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Car06g03157 330 MobiDBLite consensus disorder prediction 123 152 - -
Car06g03157 330 MobiDBLite consensus disorder prediction 274 330 - -
Car06g03157 330 MobiDBLite consensus disorder prediction 109 152 - -
Car06g03157 330 MobiDBLite consensus disorder prediction 295 330 - -
Car06g03157 330 Pfam WRC 83 125 IPR014977 -
Car06g03157 330 PANTHER GROWTH-REGULATING FACTOR 5 18 323 - -
Car06g03157 330 PANTHER - 18 323 IPR031137 GO:0005634|GO:0006351|GO:0032502
Car06g03157 330 SMART QLQ_2 20 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03157 Car-Chr6 57901870 57906325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03157 14 125 GRF Transcription Factor Family AT3G13960 61.207 3.06e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Car06g03157 WRC 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03157 - - gmx:100787226 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03157 06 57901870 57906325 Car06g03157 06 57901870 57906325 ECH