Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03134 ATGAGACTTGAATCAGGGACTTGTAACGTGTGCTCAGCTCCTTGTTCATCTTGCATGCATATTAATCAAGCTCTTATGGGGTCAAAGGCAGAAGAATACTCTGATGAAAACTGTCACTTAGAGGAGGATAATCAGTATTCTGAAGACAAGGGTGATGAATCTTGTGTTAGGGGCAGAGCTTGTGAAAGATTGAAGCATTCTGCCAGTGAAACCAGTAACATGCCCAGTGTTTTGTCCGGTCAAGATTCTCTATCTGCAAATATTGAGACTAAACAGCCCTTTTCAGATCAGTGTCAGGACTCTAAGAGTTCAGAAGGTCTTGATGATAGCATATATTCTATCAGTAGAGCCAGTAATGCTAATTTAGTGAGTTGTAGTAATCAAATAAATTCAGACAAAATAAATTTACCTTGTAGTTCAGCTTCAATTAGTCCCTCCGAGGCTCAAGGATCTGGAATTGGGCAATCGGTTGACGTGTCTGGTTTGTCTGAGATTCCCTCCTCTAAATATGCAGACGTTCCAGAAAATTTGTCAGAGTGCTGTATGGAAAATGTTGATTCATCATTGACCAAAGAGAGAGAACCTATTACTGTTTCTGATGAAAAATCTCTTCCAGATAAGAATGACCTTCTTAGTGGTACTGCCGAAATGTCAGAAAAAAGTTATCCAAAGTCAGAAGCAGATGCTGAAAATGATGTTAGTGATGCTAAAGATGGGGATCATAAATATTCAGCCCATGATGGACTGCATGAGAAGGCTGAGGAGCTGGTTAAATCACTTGGGATTCCTGTACTTCAACCAGAAGATGAGAGTGATGAATCAGATGTTGTTGAGCATGATGTAAAAGTATGTGACATTTGTGGAGATTCTGGTCGTGACCATCTACTTGCCATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGCATGCGGGAAATGCTTGAAAAGGTTCCAGAAGGGGATTGGTTTTGTGAGGAATGTCAAAATGCAGAGGAGACTGCCAACCAAAGATTGGATGTTAAAGGAAGTAAAAGTAATAAAGTTGGTTCCACTTCTCAAATTGCTGGCAAAAGGCCTTCTGAAGGCATGGAAGCAGCTCCAGCAGCAAAGAGGCGAGTCCTCGGATCAAGCAAGGGATCACCAAAGGCATCAAGCCCCAGGATATTAGTTCCACTGTCTCGGGAGTCTTCATTCAAGAGCTTAGATAATGGAAAGGCGAAACCTGGTCAATCAATCCCCATTCGTAATCACCTTCGTAGTGATGACATAGAACAAACTTGTTCTCTTTCTGCTGCCCCTCGGAGTTATACTTCAAGGACTATGGGTACCTTGTTGAAGTCTAGTTCATTCAACAGCAACAATTCCAAATCGAGAGTCAAACACGATGATGATGTTCCTCAAAAGCAGAAAGGGGGTGGTGAACACACTTCAAAGAATATGGAAACACCTAGTGCGACAATAGGAAAATCAACGTCATTCAAATCGTCAAATTTGGGTCGTGCTGCTGAGTCAAAAGTCAAAATGCTTTCTTCCAAGTCTGTAACTACTCAGGATTTGAAAGGATCAAGACATGCAAAAGAATCTGGTGTATTTGACAGGAGATCTCTATCTAGGATCGATCGACCTGCCATTTGTTCAACCATGGCTAGTTCTATCGTTTCCTCATCTAAGGGTGATCAGAAGCTTACACCTCGTGGTGAAATTGCTAAACCTTCAGCAATTAACTGCAATCGGGAGTTTAAAGGTAACCAAGATGGAAAGTCAAGTTCACTATCAAAGCCTGTGACTAATATAAGCAACAAAAATTCGGAACCTAAAGTTATTTCAGAGAGAACGTCAACCAGTTTGCATGAAACACAACAGGATTGGCTCCCTCGACCACGGGAGACTGCAAATCAGGTTGACAAAACAAAAGACAGTTTTACTCATCGTGTGAGGTCAAGTACTAATGCTTCAAAATGTCCTATCTGTCATAAATGTAAAGATTTTGGCCATGCTACAGAATGTTGCACAATAGGCAGTACACAGGAATTTGGTGCTGAAGGATCAGTCACTGCTGCTAGTAGTTCAAAAGAGATGCATAAAGGTAATAAGTTGAAATCTGCAATTCAGGTAGCTTTGCTTAGAAGGCCTGAAATACACAAGAAGAAAGATGTACATGATCAAACTGATCAGTTTCCTACACTACCCACAGTCTTGAAGTGTAAACTCAGTTCTCAAGACCAAATGTTGGTATCTAATACACTGAAAAATTGTATTTATGATGAAGAAACCAATGCGAGACAGGAAATCCTTGAGAATTCGACTACATCTGAGACGTCCAAATGTTTGTCTGCCAATGATTCAAAGCAACTTAAAATTGATTTCTGCTCTCAACTGAAAAATTCAGATTCTTTTAGTCCTGGTTCTGAAAAGCCTGCGGCGAGGGACTTGCCCAATCATGCTTTGGAAATCTCAAGGGTTGCTTCAATAATGTCAGCCGTTCCAGAATACAAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAGTGGAAAGCCTCATAACCTTTATAACGGAATACAAGCACATTTATCCTCATGCGCTTCCCCCAAGGTTCTTGATGTAGTGAACAAGTTTTTACCTGAAATTTCCCTGCATGAAGTTTCCCGCTTGAGCACATGGCCTTCGCATTTTCATCAAGCTGGTGCTAAAGAAGATAATATTGGTCTTTACTTCTTTGCCAAAGACATTGAAAGGCAAGAATATGAATATCATTCTTTTAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTCAAAGGGTTTTTTGATGGTGTTGAACTTCTCATATTCGCTTCCAATCAGCTTCCTGAAAATTCTCAACGTTGGAATATGTTGTTTTTCTTATGGGGCATATTTAGAGGGAGGAGGGGTAGTCATTCAGATTCTGCCAAAAATATTGTTTTTCCAAGTTTGAATGTGATGCCAAATGAGAAGGATTTTCCAACTGCTGTCATGACCTTGTCTGATACTCGCTGTTCACCTGTGCGCATCGATAAAGAATTAATAGCTTGTCGTCAAGCTTGCAGTGAACTTCCATCCACTTCCATTGACCAAGGTCATATGATGCTAAGTAGGGACTTTGACATAAAAGAAACTATTTTGGACCAGACACATTTGGGTTCACAAATAAACCTCGTGAGGCTAGATAGCAGAATCAACACCAAATCTTCGTCAAGGATTTCCACAAGCAGTATACAACCATGTCGAGAAATGAGTTCCACTGGTTCGTCCCAGAAAGAGAAAGGTAGTTTGTCAGAGCATAGACCACATCGAGAGTCTAAATCTCCTGAAGAGGTGGGAACAAATGTAAGTGATACGATTGTTGAAGCAAAAGCTAATTATGGTATTTCTGTCAAGCAAGAGAACTGCTTGTTTTCAAGGATTCCTTATAATGGCAATCAAGAGATAGTCACTGCAAACAAAGCCAGTAAAGAGAAAACAAACAATGACAAAAATCAACGAAGGCCTAAAAGGAAACAGATAGAAGATGATCTCAATATTAATGTGGAAGCAACATTTCAGGGAGACCTGACCATAGGAGGGATCAATTGTCAGCTACCTAATGTTAAAAAATTTGAGCATAACAACCTTTCTGATACAGTTATGGGGCCTTCTGCAGTTAGTTGTCAGAAAATGCCTTGGAATAAGGTAAATGGAAAATTCGAAGATACCAAAAGTTCTAGCAAGCTGCAGTCAGATCTCGGTGCAATTTATGGATGTTACGATTCTGTAGCTAAGGACTCTTTTAATGGAAGTTCTGCGTCACTTGTAAATGATTTTGGTTCCCATTCTTCAGTTGAGGACAAAGGAAGCAAAGAAGCTTGTGATGAGAAAATCATCCACGAGGACCCTGGAACGATGGAAAGAACCTTCTTCCCTATGGATACACATAATACAAATGACTCGCGATTGGTGATGAATAGTATGTCACTGAAAGGGCATCATGAGTGTGGGGACCAATTTCAAGTTGGGATTCCGAGTCTCGAGCTTGCATTGGGGAGTGAAATGAAACAGTCACAAAAGGGTATTTCTCATCATGTATATTCACCTGTTCTAGCTGCTTTTGTTAAAGATATAGCACATCATTGCACAATTTTTTTAAGAATGCCAGGTTTCTACTATCTAAAGAGTAGAACAGTAGGTGGCTATTGTTTACTCAATGGCGCATTGATCAAGAGTAAAGTGGTTAAAAGAAGGAGAAACTAA 4272 0.4029 MRLESGTCNVCSAPCSSCMHINQALMGSKAEEYSDENCHLEEDNQYSEDKGDESCVRGRACERLKHSASETSNMPSVLSGQDSLSANIETKQPFSDQCQDSKSSEGLDDSIYSISRASNANLVSCSNQINSDKINLPCSSASISPSEAQGSGIGQSVDVSGLSEIPSSKYADVPENLSECCMENVDSSLTKEREPITVSDEKSLPDKNDLLSGTAEMSEKSYPKSEADAENDVSDAKDGDHKYSAHDGLHEKAEELVKSLGIPVLQPEDESDESDVVEHDVKVCDICGDSGRDHLLAICSRCSDGAEHTYCMREMLEKVPEGDWFCEECQNAEETANQRLDVKGSKSNKVGSTSQIAGKRPSEGMEAAPAAKRRVLGSSKGSPKASSPRILVPLSRESSFKSLDNGKAKPGQSIPIRNHLRSDDIEQTCSLSAAPRSYTSRTMGTLLKSSSFNSNNSKSRVKHDDDVPQKQKGGGEHTSKNMETPSATIGKSTSFKSSNLGRAAESKVKMLSSKSVTTQDLKGSRHAKESGVFDRRSLSRIDRPAICSTMASSIVSSSKGDQKLTPRGEIAKPSAINCNREFKGNQDGKSSSLSKPVTNISNKNSEPKVISERTSTSLHETQQDWLPRPRETANQVDKTKDSFTHRVRSSTNASKCPICHKCKDFGHATECCTIGSTQEFGAEGSVTAASSSKEMHKGNKLKSAIQVALLRRPEIHKKKDVHDQTDQFPTLPTVLKCKLSSQDQMLVSNTLKNCIYDEETNARQEILENSTTSETSKCLSANDSKQLKIDFCSQLKNSDSFSPGSEKPAARDLPNHALEISRVASIMSAVPEYKYIWQGVFEVHRSGKPHNLYNGIQAHLSSCASPKVLDVVNKFLPEISLHEVSRLSTWPSHFHQAGAKEDNIGLYFFAKDIERQEYEYHSFRHYKGLLDHMIRNDLALKGFFDGVELLIFASNQLPENSQRWNMLFFLWGIFRGRRGSHSDSAKNIVFPSLNVMPNEKDFPTAVMTLSDTRCSPVRIDKELIACRQACSELPSTSIDQGHMMLSRDFDIKETILDQTHLGSQINLVRLDSRINTKSSSRISTSSIQPCREMSSTGSSQKEKGSLSEHRPHRESKSPEEVGTNVSDTIVEAKANYGISVKQENCLFSRIPYNGNQEIVTANKASKEKTNNDKNQRRPKRKQIEDDLNINVEATFQGDLTIGGINCQLPNVKKFEHNNLSDTVMGPSAVSCQKMPWNKVNGKFEDTKSSSKLQSDLGAIYGCYDSVAKDSFNGSSASLVNDFGSHSSVEDKGSKEACDEKIIHEDPGTMERTFFPMDTHNTNDSRLVMNSMSLKGHHECGDQFQVGIPSLELALGSEMKQSQKGISHHVYSPVLAAFVKDIAHHCTIFLRMPGFYYLKSRTVGGYCLLNGALIKSKVVKRRRN 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03134 1423 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1189 1362 - -
Car06g03134 1423 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 1188 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 1078 1102 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 447 530 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 340 421 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 579 629 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 458 477 - -
Car06g03134 1423 SMART PHD_3 283 330 IPR001965 -
Car06g03134 1423 MobiDBLite consensus disorder prediction 221 244 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 553 646 - -
Car06g03134 1423 SUPERFAMILY FYVE/PHD zinc finger 271 334 IPR011011 -
Car06g03134 1423 MobiDBLite consensus disorder prediction 1103 1120 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 340 359 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 188 244 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 188 207 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 1166 1183 - -
Car06g03134 1423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 218 343 IPR013083 -
Car06g03134 1423 PANTHER - 1189 1362 - -
Car06g03134 1423 PANTHER - 1 1188 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 478 501 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 631 645 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 1078 1125 - -
Car06g03134 1423 MobiDBLite consensus disorder prediction 1161 1183 - -
Car06g03134 1423 ProSiteProfiles Zinc finger PHD-type profile. 281 332 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03134 Car-Chr6 57028238 57036277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03134 206 341 C2H2 Transcription Factor Family AT3G01460 28.467 1.05e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03134 - - mtr:MTR_0001s0570 1919.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00105 08 810312 820061 Car06g03134 06 57028238 57036277 ECH
Car06g03134 06 57028238 57036277 Car06g03134 06 57028238 57036277 ECH