Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03133 ATGTTGACCCCATTTTTGTACCATATGGCTGCTGCTGACAACACCAACCCAAAGGATTATTACAAAGTGCTGGAGATTGATTATGATGCAACAGATGAAGATATCAGATTTAATTACCGAAGACTCGCCTTGAAATGGCATCCCGACAAACACAATGATGATAGTGTTGTTACTGCAAAATTTCAAGAGATTAATGAAGCTTACAATGTATTGAGCGATCCTGCCAAGCGTTTTGACTATGATTTAACTGGTGCGTGTGAGATTGAGAAGTATAGCTTGCAGGAATATCTTGCTAGATTTAAAGGAATGATTCTGACCTGCAATGGACTTGGTATCAGCCATAATGACAAATGGTCACAACAATTGATTGAAGGTTTTGAACAACTAGATAAATAA 396 0.3763 MLTPFLYHMAAADNTNPKDYYKVLEIDYDATDEDIRFNYRRLALKWHPDKHNDDSVVTAKFQEINEAYNVLSDPAKRFDYDLTGACEIEKYSLQEYLARFKGMILTCNGLGISHNDKWSQQLIEGFEQLDK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03133 131 SMART dnaj_3 18 76 IPR001623 -
Car06g03133 131 PRINTS DnaJ domain signature 21 39 IPR001623 -
Car06g03133 131 PRINTS DnaJ domain signature 39 54 IPR001623 -
Car06g03133 131 PRINTS DnaJ domain signature 56 76 IPR001623 -
Car06g03133 131 PRINTS DnaJ domain signature 76 95 IPR001623 -
Car06g03133 131 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 9 123 - -
Car06g03133 131 Pfam DnaJ domain 19 81 IPR001623 -
Car06g03133 131 SUPERFAMILY Chaperone J-domain 16 104 IPR036869 -
Car06g03133 131 CDD DnaJ 19 73 IPR001623 -
Car06g03133 131 ProSiteProfiles dnaJ domain profile. 19 84 IPR001623 -
Car06g03133 131 PANTHER DNAJ PROTEIN-LIKE 9 123 - -
Car06g03133 131 Gene3D DnaJ domain 7 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03133 Car-Chr6 56989923 56995411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03133 9 81 C2H2 Transcription Factor Family AT1G74250 42.308 1.69e-12 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03133 06 56989923 56995411 Car06g03133 06 56989923 56995411 ECH