Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03126 ATGGAGACTTTCTTCTATACTCTTCAAGTAAGTCCTGTTCATGATTCAATTCTTACTATGTTGCAACACATTCCTTATTTGGCCAATAGCTTCTACATTAATCTTGATTACACTAACACGATTATAGAACCCAATGCTAGAAACACCGTCTCTCTGTCCACAATTACAATCAAGGACACATTTGTTGCTCCTCTTGAAATCGTATGTAATTGTACCGAAAGGGATCCTAACAATGCTTTATACCACATATTTTCTTTCCTACCTACTTACATATTAGATTCAATTATACCTGAAGTTGAACAATGTGCTAGACAAATGGTTGCGAACAACGATGCATTGGAGATGAATTTGTCGCTTCGCGTTACGACGAGACAATGGGCAGAGCATAGTGAGAATTTGTTGGAGATATTAGAAATTGTTCATCCTTGTTATGATTCTGAAGAAAAATGTTCAATTTGTTTGGAGGAATTTTGCACTAGTTTAAAGTCAGAAATTGTTCACACAAAGTGCTCACATTTTTTCCATAAAGATTGTATTGTCCAGTGGATTCAAAGTTGTGTCAATTCTTCATCTTCTTATTCTTGTCCATTGTGTCGAGGTCAAATAATATAA 612 0.3513 METFFYTLQVSPVHDSILTMLQHIPYLANSFYINLDYTNTIIEPNARNTVSLSTITIKDTFVAPLEIVCNCTERDPNNALYHIFSFLPTYILDSIIPEVEQCARQMVANNDALEMNLSLRVTTRQWAEHSENLLEILEIVHPCYDSEEKCSICLEEFCTSLKSEIVHTKCSHFFHKDCIVQWIQSCVNSSSSYSCPLCRGQII 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03126 203 Pfam Ring finger domain 149 199 IPR001841 -
Car06g03126 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 203 IPR013083 -
Car06g03126 203 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 66 199 - -
Car06g03126 203 SMART ring_2 150 198 IPR001841 -
Car06g03126 203 SUPERFAMILY RING/U-box 144 202 - -
Car06g03126 203 ProSiteProfiles Zinc finger RING-type profile. 150 199 IPR001841 -
Car06g03126 203 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 66 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03126 Car-Chr6 56797138 56797749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03126 145 199 C3H Transcription Factor Family AT3G58720 36.364 1.24e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03126 - - cam:105851367 260.381