Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03123 ATGTCGTCGATTCCTCCGCCGCAACCGCCGCCGAATTCCTCAACAACCGATCCCTCTCCATCGACGCCGTCACCTGTCTCCGCCAGAGCAAACAAGCTCCAGAAAATCCCTCACATTCTGAATCGACACACCGCGGTAATATCCTCCTCCAATGAAGTTGAAGAAGGCGAAGAAGATAACAACAATAACAACAGCAAGAATGATGATGAGGAACAATGTGTTGAACTCGAACGTGCTGATTCTTCTTCTTCCATTTTGCTTGCGTCTTCTTTAGGTCTTAATCACATTCGAACGCGATTCTCCTCTCCTCTTCGTCATTCTTCTTCGGCTGGTGCTCCTTCGTTCATCGGAAAAGACGCTGTTCTACATGTCGCTATCAACAATGTCGCCAAATCTAAATTCAAATCTTCACATCCAAAAGACCTAGGGGAAAAAGTTCATCGGAATCAATGTAAATCATTGAAAGCTCATTCACAACTCCTTCCTGGGCTGGAGGGTAATCATGCAGCTTTCGCCAAAGAAATACAATCCCCACGTTTTCAGGAAATCCTTCGACTTACAAGTGGCAGGAAAAAGAGAAACCGTGATATTAAAAGCTTTTCTCATGAACTCAACTCCAAAGGAGTTAGGCCTTTTCCAATTTGGAAACATCGTGGGCATGTGGAGGAAGTCATGGTGGCGATTAGAGCTAAGTTTGAAAAGCTAAAGGAAGAAGTTGATTCTGATTTGGGTGGTTATGCTGGTGATTTGGTGGGTAGTCTTGAAAAAGCATCTGAGTCTCCTTGTGAATGGAAAGAGGGGTTGGAAGATTTGTTGGTTGTTGCACGACAATGTGCAAAGATGTCGCCTACTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAAACTAGATGACAAACGTCAAGAAATACCAGTGGGGATCCTCAAGCAAGCTCATACTCGCCTTTTGTTTATTCTCTCTAGGTGCACTCGTCTAGTGCAATTCCAGAAGGAAAGTGGTTATGAACAAGATCACATTCTGGGTCTTCACCAACTCAGCGATCTTGGAGTATATTCCGAGCAAATTTTGAAGGCTGCTGAGAATTGCGGTCTTCCACCCAGTGGACATGAGATGGCTGAGAAGCAGTTGAAAAAGTCGCATGGAAAAGAGGAAGACAAACCAATAACAAAACAAAGTCAAGCTGACCAACATGAGAGTGGTGTGATTGACAATGTGGAAGTTACTACAGCTAAAAGTGTTGAGTCTACTCCTAGCAGCTATAAGATGTCTTCATGGAGAAAGCTTCCATCAGCTGCTGAGAAAAAGCGCAAAGATCAAGATGCAGTAGATTTCTCATCAAAAGGTGAACCTGATCCATTGCTAGTGAAAGATGAAAATGCTGAAAATTTGGATACTATGTCATGTCACCGTGAACATTCACAGTCGTCATCTAGAACGCGAAAGGTTTCTTGGGGATTTTGGGGTGATCAGCAAAATCTAGCATATGATAATTCAATGATCTGCAGGATTTGTGAGGTTGAAATACCAATCGTACATGTGGAGGAGCATTCTCAAATATGCGCAATTGCTGATAAATGTGATTTGAAAGGCTTAACTATAAATGAGCGGCTCGAAAGAGTTTCCGAAACTATTGAAAGGTTACTTGAATCTTGGACACCTAAAAGTACTGATACTCATGGAGAAAGCTTTGAGGCTGCTAGAGTGTCAACATCAAGTTTGCATGAAGAATTCAATGAGTTATCTCTAGACAGAAATAACTTGTCTCGTAGATGCTCTGAAGACATGCTTGAACCTACTCCTGATCCTGACAATAGTTTTGCCGCAGATGATCTGAACCTTTCATCTGAAATAATAAAACCTGATCAGGGCACAAAGGTATCATCACCTGGAAGCTTGACTCCGCGATCACCGTTGGTTACACCAAGAACAAGTCAAATAGAAATGCTACTAAGTGGAAGAAGAGCAGTTTCTGATTTTGAGAGTTATGACCAGATAAATAAGCTAGTTGAAATAGCTCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTTTGGAGTATATGCTTGATCGCTTGGAAGACCTGAAATACGCAATTCAGGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGCCGACGAATAGAGAAACTTTTGCAGGAGAAATATGTAACCCTTTGTGGGCAAATAGAAGATGAAAAGGTAGACTCATCACATAGCATGGCTGATGAAGAGAGTTCGGTCGATGATGATACAGTCCGTAGTAGCCTTCGTGCTAGCCCGATTAATCCTTGTTCTAAGGACAGAACTTCTATTGAAGATTTTGAAATAATAAAACCAATAAGCAGGGGGGCATATGGACGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGTGATTTATTTGCTATTAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATGCCGTTCAAAGTATTTTGGCTGAGCGAGACATCCTTATATCTGTTAGGAACCCTTTCGTGGTCCGATTTTTCTACTCTTTCACATGTAAGGAAAATCTTTATTTGGTTATGGAGTATTTAAATGGCGGCGATCTCTATTCTATGTTGAAAAACCTAGGATGCTTAGATGAAGATATGGCTCGTATATATATTGCAGAAGTTGTTCTTGCATTGGAGTACTTGCATTCCTTGAATATAATTCATAGAGACTTGAAGCCGGATAACTTGTTGATTGGTCAAGATGGTCACATTAAGTTGACGGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACGGATGATTTATCAGCACCCTCATCTTTCACTAATGATTTTCTAGGCAATGATGAACCAAAACCTCGACATGTTTCAAAGAGGGAAGCACGTGAACAACAAAAAGTAGTTGGCACCCCAGACTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTTTGCAGTTTATCTGCTGA 2970 0.4155 MSSIPPPQPPPNSSTTDPSPSTPSPVSARANKLQKIPHILNRHTAVISSSNEVEEGEEDNNNNNSKNDDEEQCVELERADSSSSILLASSLGLNHIRTRFSSPLRHSSSAGAPSFIGKDAVLHVAINNVAKSKFKSSHPKDLGEKVHRNQCKSLKAHSQLLPGLEGNHAAFAKEIQSPRFQEILRLTSGRKKRNRDIKSFSHELNSKGVRPFPIWKHRGHVEEVMVAIRAKFEKLKEEVDSDLGGYAGDLVGSLEKASESPCEWKEGLEDLLVVARQCAKMSPTEFWIKCETIVQKLDDKRQEIPVGILKQAHTRLLFILSRCTRLVQFQKESGYEQDHILGLHQLSDLGVYSEQILKAAENCGLPPSGHEMAEKQLKKSHGKEEDKPITKQSQADQHESGVIDNVEVTTAKSVESTPSSYKMSSWRKLPSAAEKKRKDQDAVDFSSKGEPDPLLVKDENAENLDTMSCHREHSQSSSRTRKVSWGFWGDQQNLAYDNSMICRICEVEIPIVHVEEHSQICAIADKCDLKGLTINERLERVSETIERLLESWTPKSTDTHGESFEAARVSTSSLHEEFNELSLDRNNLSRRCSEDMLEPTPDPDNSFAADDLNLSSEIIKPDQGTKVSSPGSLTPRSPLVTPRTSQIEMLLSGRRAVSDFESYDQINKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYVTLCGQIEDEKVDSSHSMADEESSVDDDTVRSSLRASPINPCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCKENLYLVMEYLNGGDLYSMLKNLGCLDEDMARIYIAEVVLALEYLHSLNIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSSFTNDFLGNDEPKPRHVSKREAREQQKVVGTPDYLAPEILLGMGHGLQFIC 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03123 989 MobiDBLite consensus disorder prediction 59 77 - -
Car06g03123 989 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 28 985 - -
Car06g03123 989 MobiDBLite consensus disorder prediction 372 393 - -
Car06g03123 989 SUPERFAMILY Protein kinase-like (PK-like) 761 984 IPR011009 -
Car06g03123 989 MobiDBLite consensus disorder prediction 1 78 - -
Car06g03123 989 MobiDBLite consensus disorder prediction 394 426 - -
Car06g03123 989 Pfam Protein kinase domain 778 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03123 989 MobiDBLite consensus disorder prediction 620 640 - -
Car06g03123 989 Gene3D Phosphorylase Kinase; domain 1 775 857 - -
Car06g03123 989 MobiDBLite consensus disorder prediction 429 461 - -
Car06g03123 989 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 985 - -
Car06g03123 989 Gene3D Transferase(Phosphotransferase) domain 1 858 984 - -
Car06g03123 989 MobiDBLite consensus disorder prediction 1 18 - -
Car06g03123 989 CDD STKc_MAST_like 784 984 - -
Car06g03123 989 ProSiteProfiles Protein kinase domain profile. 778 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03123 989 MobiDBLite consensus disorder prediction 363 461 - -
Car06g03123 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Car06g03123 989 SMART serkin_6 778 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03123 Car-Chr6 56663154 56669733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03123 14 984 AGC Kinase Gene Family AT5G62310 60.080 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Car06g03123 Pkinase 9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03123 - - gmx:100806311 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03123 06 56663154 56669733 Car06g03123 06 56663154 56669733 ECH