Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03121 ATGGCATTGCAATTGCATAATCTTATTGATATTTCAATGAGTTACCATAAATTCTTCAAAATAATTTTTTCCATTCTATTCATATCAACCCTTCTTCAATCTACAACATCTACATCCAACCTCACCACAAATTCAAATTCCACTTCAACATACAAAAAATTCTTAAAGAATCAATGCAATTCAACCACATACCCAAATGTATGCTACAAGTCACTTTCCCCATACACATCCAAAATCAAAACAAACTTTTTCACACTAACCAAAATATCCATCTATCTAGCTCTAAAATCATCAAGAAGTGCATCAATGATGTTGAAAAAATTAAGTTCCAAGAAACTAACACATGACGAAACACTGGTCATCGCCGATTGCATAGAAAACATCGACGACACCGTTGATGTACTCACGCAATCAGCAGACGGGCTAGTGCATTTGAATGGTACCACAAGTAGTGATGAAAAGTTTCAATGGGATACCATAAAGACATGGATGAGTTCAGCTATAACAGATGAAGGAACATGTACGGATGAGTTGGATGAAATGGAAGTGAGGTCCTCAATTCAAAAGAAGATCAAAACAAGTGTTGGTAAAACTGTTTTCTTGACTAGCAATTCTCTGGCTTTTGTAAATAGTCTTTCCTATTAA 645 0.3488 MALQLHNLIDISMSYHKFFKIIFSILFISTLLQSTTSTSNLTTNSNSTSTYKKFLKNQCNSTTYPNVCYKSLSPYTSKIKTNFFTLTKISIYLALKSSRSASMMLKKLSSKKLTHDETLVIADCIENIDDTVDVLTQSADGLVHLNGTTSSDEKFQWDTIKTWMSSAITDEGTCTDELDEMEVRSSIQKKIKTSVGKTVFLTSNSLAFVNSLSY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03121 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 212 - -
Car06g03121 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 212 IPR006501 GO:0004857
Car06g03121 214 SMART PMEI_2 50 208 IPR006501 GO:0004857
Car06g03121 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 212 - -
Car06g03121 214 Pfam Plant invertase/pectin methylesterase inhibitor 54 207 IPR006501 GO:0004857
Car06g03121 214 CDD PMEI-like_3 59 213 - -
Car06g03121 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 213 IPR035513 -
Car06g03121 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 212 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03121 Car-Chr6 56621464 56622676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03121 42 213 Carbohydrate Esterase AT1G53830 30.387 2.55e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03121 - - cam:101501841 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03121 06 56621464 56622676 Car06g03121 06 56621464 56622676 ECH