Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03120 ATGGAAGTATTTTCTTCAAAGACCCTTCTCATAGTTATTGCCTTTAGTTTGATTATCACAAACTCTTACCAAGCAAATGAAAGACAATACCAACAAGCCAACACATTATTCATTAGAACATCTTGTAGTTCCACAACTTATCCAAGACTTTGCTACGCTTCTCTAGTGAAGCATGCAAATTCCATTCAAACGAATCGCTTTCTTTTAACAGACACGGCCTTGAATGTGACTCTTGCAACGGTTAAATCAACATGGGCTATGATGTCAAGTTTGGCTAAAACCCGGGAGTTGAAGCCAAGAGAGACCGCAGCTATGAAGGATTGCATCGAGCTGCTTAGCGACTCGATCGATGAACTCCGAAAGTCTATCAACGAGATGAGTCGTCTTAGGACATCAAATTTTGAGCTAACAATGAGTGATATACAAACTTGGGTTAGTGCTGCCTTGACGGATCAAAGTACTTGTAGCGACGGATTCGAAGAGATTAATGCAACGGGAGATATTAAGACAATAGTGCAAGTGAAAATTGTGCAAGTGGCACAATTGACTAGCAATGCTTTGGCTTTGATAAATAAGCTAGCCACTTCACATGGTTAA 597 0.402 MEVFSSKTLLIVIAFSLIITNSYQANERQYQQANTLFIRTSCSSTTYPRLCYASLVKHANSIQTNRFLLTDTALNVTLATVKSTWAMMSSLAKTRELKPRETAAMKDCIELLSDSIDELRKSINEMSRLRTSNFELTMSDIQTWVSAALTDQSTCSDGFEEINATGDIKTIVQVKIVQVAQLTSNALALINKLATSHG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03120 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 195 IPR035513 -
Car06g03120 198 PANTHER 21 KDA PROTEIN-LIKE 4 195 - -
Car06g03120 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 193 IPR035513 -
Car06g03120 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 193 IPR006501 GO:0004857
Car06g03120 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 195 - -
Car06g03120 198 Pfam Plant invertase/pectin methylesterase inhibitor 37 189 IPR006501 GO:0004857
Car06g03120 198 SMART PMEI_2 33 189 IPR006501 GO:0004857
Car06g03120 198 CDD PMEI-like_3 40 195 - -
Car06g03120 198 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03120 Car-Chr6 56613446 56614567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03120 18 193 Carbohydrate Esterase AT3G14310 30.168 2.49e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03120 - - gmx:100802601 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03120 06 56613446 56614567 Car06g03120 06 56613446 56614567 ECH