Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03114 AGATTTGCAGAATTGGAACAGAAGAACAAAATGAATGGTATTTTTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACAAGAACAAATAGAGCAACAACTGCTGGATTTTGGAAAGCAACAGGAAGAGACAAAGCAATTTATAGTAAGCATGATTTGATAGGGATGAGGAAAACCTTAGTGTTTTATAAAGGTAGAGCTCCAAATGGACAAAAATCAGATTGGATCATGCATGAGTATCGACTTGAAACAGATGAAAATGGCACACCACAGGCAAAAGGATGGGTAGTGTGTAGAGTATTCAAGAAAAGAGTAACAACAATGCGCAAAGTGATGAGTGAACATGACTCCCCTTCTTGGTATGATGACCAACTCTCTTTCAATATGCAAGACATGGTTGACTCACCAAATCAAACCTCTTATCAATCAAATTTGGTTTACCAACAATTACCATTATACCCTTGCAAAAAAGAGCTTGAACATTTACAATTCCAATTGCCACGTGACCAATTTCTTCAACTACCACTTCTAGAGAGTCCAAAACTTCTTCAACCTAATTCTTCAACCAATTTAACCTCTAATAATCCTATGATTCCAACATTCAATGCTCTTAATCTTCCTTCATCAATATTGATAGAAGAACAACAAGTCCTACAAAATGGTCAACAAAATCTTCATCATGGTATTGTGTATGGGAATAATTGCCATGAACAAAATGTGGATGATCAAGTTACTGATTGGAGGGTTCTTGACAAATTTGTTGCTTCACAACTTAGTCAAGATGGTTCAAAAGACAACAATAATAACATGTTTCATGGCACGGATGACAATAGCAATGTTCAATTCAGAAATTTGGAGAAACAAGAAATGGTGCATGAAATTAATGCATCAACATCAAACTCAAGCTGCCCAATTGATTTGTGGAAATAG 929 0.3552 ICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQAKGWVVCRVFKKRVTTMRKVMSEHDSPSWYDDQLSFNMQDMVDSPNQTSYQSNLVYQQLPLYPCKKELEHLQFQLPRDQFLQLPLLESPKLLQPNSSTNLTSNNPMIPTFNALNLPSSILIEEQQVLQNGQQNLHHGIVYGNNCHEQNVDDQVTDWRVLDKFVASQLSQDGSKDNNNNMFHGTDDNSNVQFRNLEKQEMVHEINASTSNSSCPIDLWK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03114 308 SUPERFAMILY NAC domain 8 102 IPR036093 GO:0003677|GO:0006355
Car06g03114 308 ProSiteProfiles NAC domain profile. 1 102 IPR003441 GO:0003677|GO:0006355
Car06g03114 308 Gene3D NAC domain 2 106 IPR036093 GO:0003677|GO:0006355
Car06g03114 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 297 - -
Car06g03114 308 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 5 297 - -
Car06g03114 308 MobiDBLite consensus disorder prediction 257 277 - -
Car06g03114 308 Pfam No apical meristem (NAM) protein 7 81 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03114 Car-Chr6 56189447 56191258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03114 1 306 NAC Transcription Factor Family AT1G62700 49.577 1.65e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g03114 NAM 4.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03114 - - gmx:100809525 398.282