Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03113 ATGGCCAAGCATAATGTTATATTCTTTTTTTTCGTGTCTTTGGTCTTGGCATCAATAATTTTGTGTGATGCCATTGAAATTGGTGAAGAAAGTAGTAAAGTTCACATTGTATATATGGGCTCACTTCCTAATGAAGAATCGTATTCCCCATCTTCTCATCATCTTAACATGTTGCAACAAGTTATTGATGACAGCGATGTAGAATATCGTTTAATTCGAAGTTATAAGAGGAGTTTCAATGGTTTTGCTGCCATACTCAATGATCAACAAAGAGAAAAGCTTTCAAgcatgaaaggtgtagtctcaatttttccaagcccaaagtttcacattcaaacaacaaggtcgtgggacttccttggatttcctcaatcaatcaagagagatcaaactattgagagtgatttagtagttggagttatagatactggaatttggccagaatccgaaagtttcaacgacggagGTCTTGGTCCTATTCCAAAAAAGTGGAAGGGAGTTTGTGCAGGTGGTATAAACTTCAAGTGCAACAACAAGATTATTGGAGCACGAAATTATGGTGAAGATGATAGTGcaagagactatgctggtcatggaagccacacagcatcaacagcaggtggaagagaggttaaagatgtgagtttttatggtcttgcaaaaggcactgcaagaggtggagtcccatcttcaagaatttctgtatacaaaatatgtggtgcagatggtaaatgtaatggtgaggaattgttagctgcatttgatgatgccattgccgatggagttgatatcataaccctctctattggtagccaacatatctttgaattttttgaagatcctgttgccattggttcttttcatgccatggagaagggaatacttacaacacatgctgcaggaaactttggtcctgacccaagtactacttccagtgtagcaccttggttatttactgttgctgcaactaccatagatcgtcaattcattGATAAACTCATCCTTGGAAATGGAAAGACTATTATTGGAAAGTCAATCAATACTATCCCTTCAAATGGCACTAAATTTCCAATAGCTGTGCGTAACGCTGAAGCTTGCCTTGAAGGACATAAATCCCCTGAAATGTGTGATTGTGTAGATAGAAAACTAGTGGAAGGTAAGCTTGTTTTGTGTGGATCACCAATAGGTGCACAATTGGCTTATTCAAAAGGTGCAATCGGTACAATACTTAATGTTCCACACACTGAAAATCAAGTTTCTCTAGTCACTCGAAGGCGTTCACTTAACTTGGATACAGAGGATTTTGTTGGTGTTCAATCCTTCGTAAACTCCACCAAATACCCTGAAGCTGAGATTTTAAAGAGTGAAACTATTCAGGACACTACAGCTCCTGAGGTTGCCATTTTCTCTTCTCGTGGCCCCAATCCTAAGGTTGCAGAAATTATGAAACCAGATATAAGTGCTCCAGGAGTGGATATTTTGGCTGCATATTCACCCGAAGCATCACCATCAGATGAACTTGGTGA 1526 0.2346 MAKHNVIFFFFVSLVLASIILCDAIEIGEESSKVHIVYMGSLPNEESYSPSSHHLNMLQQVIDDSDVEYRLIRSYKRSFNGFAAILNDQQREKLSSMKGVVSIFPSPKFHIQTTRSWDFLGFPQSIKRDQTIESDLVVGVIDTGIWPESESFNDGGLGPIPKKWKGVCAGGINFKCNNKIIGARNYGEDDSARDYAGHGSHTASTAGGREVKDVSFYGLAKGTARGGVPSSRISVYKICGADGKCNGEELLAAFDDAIADGVDIITLSIGSQHIFEFFEDPVAIGSFHAMEKGILTTHAAGNFGPDPSTTSSVAPWLFTVAATTIDRQFIDKLILGNGKTIIGKSINTIPSNGTKFPIAVRNAEACLEGHKSPEMCDCVDRKLVEGKLVLCGSPIGAQLAYSKGAIGTILNVPHTENQVSLVTRRRSLNLDTEDFVGVQSFVNSTKYPEAEILKSETIQDTTAPEVAIFSSRGPNPKVAEIMKPDISAPGVDILAAYSPEASPSDELG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03113 508 Gene3D - 326 459 - -
Car06g03113 508 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Car06g03113 508 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Car06g03113 508 PRINTS Subtilisin serine protease family (S8) signature 406 422 IPR015500 -
Car06g03113 508 CDD Peptidases_S8_3 109 325 IPR034197 -
Car06g03113 508 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Car06g03113 508 SUPERFAMILY Subtilisin-like 115 498 IPR036852 GO:0004252|GO:0006508
Car06g03113 508 Gene3D Peptidase S8/S53 domain 135 503 IPR036852 GO:0004252|GO:0006508
Car06g03113 508 CDD PA_subtilisin_like 333 452 - -
Car06g03113 508 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 506 IPR045051 -
Car06g03113 508 ProSiteProfiles Serine proteases, subtilase domain profile. 116 508 - -
Car06g03113 508 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 111 IPR037045 -
Car06g03113 508 Pfam Subtilase family 134 497 IPR000209 GO:0006508|GO:0008236
Car06g03113 508 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 34 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03113 Car-Chr6 56106922 56108765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03113 33 506 Subtilisin-like Serine Gene Family AT5G59120 52.192 2.50e-178 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03113 - - mtr:MTR_6g055410 666.766