Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03100 ATGAAACCTTTTCTTTTTTTTCTCATCACATTCTCCTTCTTTTTCCAAATACAGTTACTACTAGTTTCCTCTGCCACTACTCTACCCCTTCAACTCATAACCCTCATCTCAATAAAATCTTCCCTCATTGACCCTCTCAATCACCTCAATGACTGGAAAAACCCCACTTTCTCAAACTCCAGTGACCACAACCAAGACCCAAATTGGTGGTGTTCTTGGAGAGGCATCACTTGCCACCCAAAAACATCACAAATCACCTCCTTAAACCTCTCTAACCTAAACCTTTCAGGCACAATCTCACCCAAAATCCGCTTCTTAACAACCTTAACCCACTTGAACGTAAGTGGAAATGGTTTCGATGGAACTTTCCAACCAGCGATTTTCCAACTCACGGAGCTTAGAACACTAGACATAAGCCATAACTCATTCAACTCAACTTTCCCACCTGGAATTTCTAAGCTAAGATTCTTAAGAATTTTCAATGCTTACAGCAACAGCTTCACAGGACCTCTTCCTAAAGAACTAATCAGGCTTCCATTTCTAGAACAACTCAACCTAGGTGGAAGCTACTTCAATGACATAATTCCACCAAGCTATGGAACTTTCCAAAGACTCAAGTTCCTAAATTTAGCTGGTAATGCATTGGAAGGTTCATTAACACCTCAACTAGGCTTATTATCAGAGCTACAACACTTGGAAATTGGATACAACACATTCTCAGGAACAATACCAGTTGAATTAACAATGTTGTCTAATCTCAAATACTTAGACATCTCATCCAGCAACCTTTCAGGTCAATTGATTCCTGAACTAGGAAACCTAACGATGCTTGAAACATTGCTACTTTTCAAGAATCGGTTTGGCGGTGAAATCCCATCAAGCATAGGAAAGTTGAAATCACTGAAAACTCTTGATTTATCAGTCAATGAACTCACAGGTTCAATTCCATCAGAAATAACAATGCTGAAGGAAGTAACTGTGTTGAATCTCATGGTTAACAAGCTAACAGGTGAAATTCCACAAGCAATTGGTGAGCTTCCAAAACTCACCATTTTCAATGTTTTCAACAACTCACTCACAGGTACACTACCACAAAAACTCGGTTCTAACGGGTTACTTCAAAGAATTGATGTTTCCACAAACTCACTTCAAGGTTCAATCCCTATCAACGTTTGCAAAGAGAACAATCTCCTTAGGATCATTCTATTCAACAACAATTTCACCAATAATCTTCCATTATCACTCACAAAATGCACCTCACTCACTAGGGTGCGTATACAAAACAACAAACTCAACGGTTCAATCCCACAAACACTCACGTTGCTTCCTAATTTAACGTTCCTTGATTTAAGCAACAACAATTTCAACGGTGAAATCCCTCGTGAATTAGGGAACCTTGAGTACTTGAACATCTCAGGAAACTCGTTTCAAAGCCATTTACCTAACAACATTTGGAACGCGAGTAATCTACAGATTTTCTCAGCTTCGTTTTCGAAAATCAAAGGTCAAATTCCAGATTTCGTTGGATGCAAAACCATGTACAAGATTGAATTGCAAGGGAATTTCATCAACGGTACTATTCCTTGGGATATAGGTCACTGTGAGAAACTAATTCTGTTGAATCTAAGTAGAAACTTTCTCACCGGAATCATACCTTGGGAAATCTCGACGCTTCCTTCAATCACCGACGTTGATCTCTCGCAAAACTCACTCACCGGAACTATACCTTCAAGCTTCAACAACTGTTCCACTCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCACCGGTCCTATACCTTCCTCGGGCGTCTTCACCAGCCTTCATCCTTCGTCCTACTCCGGCAACGAAAACCTCTGCGGTCGTCTGTTAGCCAAGCCTTGCGCTGAAGACGTACTCTCCGCCGGCGAGAACGAACTCGAGATACACCGCCAAGAACCAAAGAAAACCGCCGGCGCAATCGTTTGGATTATCGCGGCGGCATTCGGAATCGGACTGTTCGTCCTCGTCGCCGGAACACGTTGTTTCCACGCGAATTATAACCGTCGATTTAACGGAAACGAAAGTAACGGCGAAATCGGACCGTGGAAGTTAACAGCGTTTCAGCGGTTAAATTTCACGGCGGAGGACGTACTGGAATGCGTGTCTATGTCCGATAAGATATTAGGAATGGGGTCCACTGGAACGGTTTATAAAGCGGAAATGCCAGGTGGAGAAATCATAGCCGTGAAACAACTATGGGGAAAACAAAAGGAGAGTAAAATCATAAGGAGAAGAGGCGTTTTAGCTGAGGTGGATGTATTGGGGAACGTGAGACACAGAAATATAGTGAGATTGTTAGGGTGTTGCAGCAACAGGGAGTGTACAATGCTGCTTTACGAGTACATGCCAAATGGGAACCTCGATGATTTGTTACATGCAAAGAATAAAGGGGACAATATGGTTGCTGATTGGTTTACAAGGTATAAGATAGCTTTGGGTGTGGCTCAGGGGATATGCTATCTTCACCATGACTGTGATCCTGTTATTGTTCATAGGGATCTTAAACCTAGTAACATTTTATTGGACGCTGATATGGAGGCTAGAGTAGCTGATTTTGGTGTTGCTAAGTTGATTCAAACGGATGAGTCCATGTCTGTCATTGCTGGATCCTATGGTTACATTGCTCCAGAATATGCTTATACACTACAAGTTGATGAGAAGAGTGATATTTACAGCTATGGAGTTGTGTTAATGGAAATTTTAAGTGGAAAACGTTCAATGGATCAAGAATTCGGCGATGCAAATAGCATCGTAGATTGGGTTAGGTCCAAAATAAAAACTAAAGACGGTATAGATGGTATATTGGACAAGAATGCAGGGGCAAGGTGTAGCTCAGTGAGGGAAGAAATGATACAAATGCTTAGAATTGCATTACGTTGTACAAGTAGAAATCCAGCTGATAGACCTTCAATGAGAGATGTTGTGTTGATGCTGCAAGAGGCCAAACCTAAAAGGAAATTGCTTGGTAGTGTTGTTGTATGTGCTAGTGACAATGTTGTTGGTGGAGGTGATATTCCATTGGCACAAAAGCCAACCAATGAAAGCTAG 3090 0.4155 MKPFLFFLITFSFFFQIQLLLVSSATTLPLQLITLISIKSSLIDPLNHLNDWKNPTFSNSSDHNQDPNWWCSWRGITCHPKTSQITSLNLSNLNLSGTISPKIRFLTTLTHLNVSGNGFDGTFQPAIFQLTELRTLDISHNSFNSTFPPGISKLRFLRIFNAYSNSFTGPLPKELIRLPFLEQLNLGGSYFNDIIPPSYGTFQRLKFLNLAGNALEGSLTPQLGLLSELQHLEIGYNTFSGTIPVELTMLSNLKYLDISSSNLSGQLIPELGNLTMLETLLLFKNRFGGEIPSSIGKLKSLKTLDLSVNELTGSIPSEITMLKEVTVLNLMVNKLTGEIPQAIGELPKLTIFNVFNNSLTGTLPQKLGSNGLLQRIDVSTNSLQGSIPINVCKENNLLRIILFNNNFTNNLPLSLTKCTSLTRVRIQNNKLNGSIPQTLTLLPNLTFLDLSNNNFNGEIPRELGNLEYLNISGNSFQSHLPNNIWNASNLQIFSASFSKIKGQIPDFVGCKTMYKIELQGNFINGTIPWDIGHCEKLILLNLSRNFLTGIIPWEISTLPSITDVDLSQNSLTGTIPSSFNNCSTLENFNVSFNSLTGPIPSSGVFTSLHPSSYSGNENLCGRLLAKPCAEDVLSAGENELEIHRQEPKKTAGAIVWIIAAAFGIGLFVLVAGTRCFHANYNRRFNGNESNGEIGPWKLTAFQRLNFTAEDVLECVSMSDKILGMGSTGTVYKAEMPGGEIIAVKQLWGKQKESKIIRRRGVLAEVDVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNMVADWFTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDADMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSMDQEFGDANSIVDWVRSKIKTKDGIDGILDKNAGARCSSVREEMIQMLRIALRCTSRNPADRPSMRDVVLMLQEAKPKRKLLGSVVVCASDNVVGGGDIPLAQKPTNES 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03100 1029 SMART serkin_6 716 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03100 1029 ProSiteProfiles Protein kinase domain profile. 716 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03100 1029 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 1017 - -
Car06g03100 1029 SUPERFAMILY RNI-like 83 390 - -
Car06g03100 1029 SUPERFAMILY Protein kinase-like (PK-like) 719 992 IPR011009 -
Car06g03100 1029 Gene3D Transferase(Phosphotransferase) domain 1 796 1006 - -
Car06g03100 1029 Gene3D Phosphorylase Kinase; domain 1 691 795 - -
Car06g03100 1029 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 3 1017 - -
Car06g03100 1029 SUPERFAMILY L domain-like 310 620 - -
Car06g03100 1029 Pfam Leucine Rich repeat 299 313 IPR001611 GO:0005515
Car06g03100 1029 Pfam Leucine Rich repeat 107 121 IPR001611 GO:0005515
Car06g03100 1029 ProSiteProfiles Leucine-rich repeat profile. 300 322 IPR001611 GO:0005515
Car06g03100 1029 ProSitePatterns Protein kinases ATP-binding region signature. 722 744 IPR017441 GO:0005524
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Car06g03100 1029 Pfam Protein kinase domain 719 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 191 294 IPR032675 -
Car06g03100 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 465 510 IPR032675 -
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 391 464 IPR032675 -
Car06g03100 1029 Pfam Leucine Rich Repeat 536 557 IPR001611 GO:0005515
Car06g03100 1029 Pfam Leucine Rich Repeat 444 466 IPR001611 GO:0005515
Car06g03100 1029 SMART LRR_typ_2 298 322 IPR003591 -
Car06g03100 1029 SMART LRR_typ_2 346 370 IPR003591 -
Car06g03100 1029 SMART LRR_typ_2 442 462 IPR003591 -
Car06g03100 1029 SMART LRR_typ_2 130 154 IPR003591 -
Car06g03100 1029 SMART LRR_typ_2 463 487 IPR003591 -
Car06g03100 1029 SMART LRR_typ_2 558 581 IPR003591 -
Car06g03100 1029 Pfam Leucine rich repeat N-terminal domain 31 78 IPR013210 -
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 511 625 IPR032675 -
Car06g03100 1029 Gene3D Ribonuclease Inhibitor 300 389 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03100 Car-Chr6 55729224 55733858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03100 4 1011 Receptor kinase-like Gene Family AT1G08590 42.289 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car06g03100 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03100 - - gmx:100813189 1585.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03100 06 55729224 55733858 Car06g03100 06 55729224 55733858 ECH