Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03087 ATGATTATCCATAACCATAACTACAAATTTGCAATTCCACATACTTTGTTTGTTCTTTTGTTGCTAGCTCTATGTCAAGTATCTTCAGGGTTAACACAAGTTGAAGCCTTGTTCAAATGGAAACAAAGTCTCCCTCAACAACAAATTCTTGATTCATGGATCATTAACAATTCAACATCAAATTCAACACAAAATACACCATGTTCATGGAGAGGTATCACTTGTGATTCTCATGGAAGTGTTATAGTCATAAACTTGGCTTATACTGGACTTGAAGGTACTCTTAAACACTTAAACTTATCAGTTTTTCCAAACCTTCTTCGTCTCGATCTCAAAACAAACAACCTCACTGGTACCATACCTGAAAACATCGGCGTTCTTTCAAAACTCCAATTTCTTGATCTTTCTACTAATTACTTCGATGGAACTTTGCCTCTTTCTATATCCAATTTGACTCAAGTTTACGAGCTTGATGTCTCGAGAAACGACGTATCAGGGATATTAGACCGTCGTTTATTTCCTGATGGAACTGGTAAGTTCAGTTCCAAAACTGGACTTCTCAGCATCAGGAATCTACTTTTCCAGGATACCCTTTTGGGTGGACGGATTCCAAATGAAATAGGGAATATAAAAAACTTGACTTTGCTAGCTCTTGATGCAAACAATTTCTTTGGGCCTATTCCTTCATCTTTAGGAAACTGTACACATTTAAGCATTCTTAGATTGAATGAAAACCAATTCACTGGCCCAATTCCACCAAGTATAGGCAAACTCACCAACCTAACTGATTTAAGGTTTTTCACTAACAACTTAAATGGTACAGTGCCACAAGAATTTGGAAACCTTTCTTCTTTGATTGTTTTACATCTTGCTGAGAACAATTTCATTGGTGAGTTACCACCACAAGTTTGCAAAAGTGGAAAGCTTGTGAATTTTAGTGCAGCCTTTAATAGTTTCACTGGCCCTATTCCAAGAAGCCTTAGAAATTGTCCTTCTTTGTATAGAGTTAGGCTTGAATACAACAAGCTAACAGGTTATGCAGATCAAGATTTTGGAGTTTATCAAAATCTAACTTATATGGATTTCAGCTATAATAGAATAGAAGGTGATTTATCTTCTAATTGGGGTGCATGCAAAAACTTACAATTTCTCAATATGGCTGGAAATTCAGTGAATGGTAACATTCCAAGTGAAATTTTTCATATGGGTCAATTGCAAGAGCTTGATCTGTCTTTTAACCAATTATCAGGAAACATTCCTTCAAAAATAGGAAACTCTTCAAATTTGTATAATTTAAATTTGAGAGGAAATAGGCTTTTTGGTAAGATACCTATTGAAATTGGAAAGCTTTCTAATTTGCAAATTTTAGACCTTTCAATGAACATGTTATTTGGACCAATTCCAATTCAAATAGGCGATTGTTCCAATTTGTTGAGTTTGAATTTAAGTAACAATGAATTGAATGGCACAATTCCTTTCCAAATTGGGAACCTTGCATCTTTACAAGACTTTTTGGACTTGAGTTACAATGATTTTTCAGGTGAAATTCCTCCTAACATTGGCAAGCTTTCAAATTTGATAAGCTTGAATATCTCTCACAACAATTTATCAGGTCCTATCCCTAATGCAATTAGTGGAATGTTGAGTTTGTCAACTTTGAATCTCTCTTACAATCATTTGGAGGGAAATGTTCCTAAAGATGGCATATTCAATTCTTCTTATCCACTTGATTTAAGCAACAATCCAAATTTATGTGGAAATTTTAAAGGTTTGCAACATTGTAATGTGTCACTCAATGAACCTAGTAATGGAAGTAACAAAAACAAGGTTGTGATTCCTATTGTTGCTTCTTTAGGGGGTGCCCTTTTAGTTTCATTGGTGTTTGTTGGTATATTTTTGTTTTGTTATAAGAGAAAGTTAAGAACTTCAAGACAAAAGTCTTTTTTGGAGATACCAAATCCCTTTTCAATTTGGTACTTCAATGGAAGAGTTGTGTATGGAGACATAATTGAAGCTACAAAGAATTTTGACAACAAGTATTGCATTGGTGAAGGAGCATTTGGGAATGTTTATAAAGCTGAGATGCCAGGAGGACAAATATTTGCCGTGAAAAAGTTGAAGTGTGATGAAGAAAATTTAGACACCGAGAGTATAAAATCCTTCGAAAGCGAGGTGGAAGCAATGACAGAGACGCGACACAGAAACATAGTGAAGCTTTATGGATTTTGTTGCGAAGGGATGCACACATTTCTTGTTTATGAGTATATGGATAGAGGGAGTTTAGCTGAAATGTTGAATGATGATAAGAAAGCATTGGAATTAGATTGGTATAAAAGGGTTGAGATTGTGAAAGGTGTTGCAAGTGCTCTTTCTTATATGCATCATGATTGTTCTCCACTTTTAATTCATAGAGACATATCAAGCAAGAATGTTTTATTGTCTTCCAATCTTGAAGCTCATGTCTCAGATTTTGGGACAGCAAGGTTTCTAAAGCATGATTCACCTATTTGGACATCATTTGCTGGCACATATGGATATGCTGCTCCAGAACTTGCTTACACAATGGCAGTGACAGAGAAATGTGATGTATTCAGCTTTGGTGTTTTGGCATTTGAGATTCTAACAGGAAAGCACCCTGGTGATCTTGTTTCTTACATTCAAACTTCTAATGATCAAAAGATAGACTTCAAAGAGATTTTAGACCCTCGTCTTCCTCCTCCAAATAAGAACATTATGAAGGAATTGTCATTGATTGCAAATTTAGCTCTTGCTTGTTTATACACAAATCCTCAATCTAGACCAACCATGAGAGGTATAGCACAGTTGCTAGAAATGGAGAGTGCATATAACTCTTAA 2856 0.3529 MIIHNHNYKFAIPHTLFVLLLLALCQVSSGLTQVEALFKWKQSLPQQQILDSWIINNSTSNSTQNTPCSWRGITCDSHGSVIVINLAYTGLEGTLKHLNLSVFPNLLRLDLKTNNLTGTIPENIGVLSKLQFLDLSTNYFDGTLPLSISNLTQVYELDVSRNDVSGILDRRLFPDGTGKFSSKTGLLSIRNLLFQDTLLGGRIPNEIGNIKNLTLLALDANNFFGPIPSSLGNCTHLSILRLNENQFTGPIPPSIGKLTNLTDLRFFTNNLNGTVPQEFGNLSSLIVLHLAENNFIGELPPQVCKSGKLVNFSAAFNSFTGPIPRSLRNCPSLYRVRLEYNKLTGYADQDFGVYQNLTYMDFSYNRIEGDLSSNWGACKNLQFLNMAGNSVNGNIPSEIFHMGQLQELDLSFNQLSGNIPSKIGNSSNLYNLNLRGNRLFGKIPIEIGKLSNLQILDLSMNMLFGPIPIQIGDCSNLLSLNLSNNELNGTIPFQIGNLASLQDFLDLSYNDFSGEIPPNIGKLSNLISLNISHNNLSGPIPNAISGMLSLSTLNLSYNHLEGNVPKDGIFNSSYPLDLSNNPNLCGNFKGLQHCNVSLNEPSNGSNKNKVVIPIVASLGGALLVSLVFVGIFLFCYKRKLRTSRQKSFLEIPNPFSIWYFNGRVVYGDIIEATKNFDNKYCIGEGAFGNVYKAEMPGGQIFAVKKLKCDEENLDTESIKSFESEVEAMTETRHRNIVKLYGFCCEGMHTFLVYEYMDRGSLAEMLNDDKKALELDWYKRVEIVKGVASALSYMHHDCSPLLIHRDISSKNVLLSSNLEAHVSDFGTARFLKHDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEILTGKHPGDLVSYIQTSNDQKIDFKEILDPRLPPPNKNIMKELSLIANLALACLYTNPQSRPTMRGIAQLLEMESAYNS 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03087 951 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 5 947 - -
Car06g03087 951 SMART LRR_typ_2 103 127 IPR003591 -
Car06g03087 951 SMART LRR_typ_2 282 306 IPR003591 -
Car06g03087 951 SMART LRR_typ_2 547 572 IPR003591 -
Car06g03087 951 SMART LRR_typ_2 523 546 IPR003591 -
Car06g03087 951 SMART LRR_typ_2 402 426 IPR003591 -
Car06g03087 951 SMART LRR_typ_2 450 474 IPR003591 -
Car06g03087 951 SMART serkin_6 676 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03087 951 SUPERFAMILY RNI-like 318 571 - -
Car06g03087 951 Gene3D Ribonuclease Inhibitor 180 265 IPR032675 -
Car06g03087 951 Gene3D Ribonuclease Inhibitor 32 179 IPR032675 -
Car06g03087 951 Gene3D Ribonuclease Inhibitor 468 594 IPR032675 -
Car06g03087 951 Pfam Protein kinase domain 679 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03087 951 Gene3D Transferase(Phosphotransferase) domain 1 756 950 - -
Car06g03087 951 PRINTS Leucine-rich repeat signature 405 418 - -
Car06g03087 951 PRINTS Leucine-rich repeat signature 450 463 - -
Car06g03087 951 Pfam Leucine rich repeat 522 560 IPR001611 GO:0005515
Car06g03087 951 SUPERFAMILY RNI-like 84 416 - -
Car06g03087 951 Gene3D Phosphorylase Kinase; domain 1 641 755 - -
Car06g03087 951 ProSiteProfiles Protein kinase domain profile. 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03087 951 ProSitePatterns Tyrosine protein kinases specific active-site signature. 801 813 IPR008266 GO:0004672|GO:0006468
Car06g03087 951 ProSitePatterns Protein kinases ATP-binding region signature. 682 705 IPR017441 GO:0005524
Car06g03087 951 Pfam Leucine rich repeat N-terminal domain 32 76 IPR013210 -
Car06g03087 951 Gene3D Ribonuclease Inhibitor 371 467 IPR032675 -
Car06g03087 951 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 5 947 - -
Car06g03087 951 SUPERFAMILY Protein kinase-like (PK-like) 650 945 IPR011009 -
Car06g03087 951 Gene3D Ribonuclease Inhibitor 266 370 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03087 Car-Chr6 55006944 55010448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03087 13 849 Receptor kinase-like Gene Family AT4G08850 39.381 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car06g03087 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03087 - - aprc:113866080 1463.74