Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03080 ATGGCACTAGCATTAACACAATGCTCACAAAAATTAGGCTACCTCATTTTTCTGTTAGGGAAAAACTTTGTTATGTTTATGGCTATGGTAATTGCATGCAATGCTTTGCATTATTTACTAAAGCCTTATCAACAACCCCGCATTACATCGGACATACTCGTGGGACTAATTATGGGAAATGCGCCATTTTTACGCGATCTATATGGACAATTCAACGGTACCTTTGGATTTATAATTGATTTTGGTATGATGTGTTACATGTTGGCAGTAGGTATGGAAATGGATCCTTACGTACTCTTCAAGAAACCAAGTAGAGATGTTCAAGTTGCTATTGTAGGAATAATAACCACATTCCTCATGGCATGCTTCATAACACCATTTCTCCATTACTTCACAGGCCACCATTTACTAGAATACACCCTCTCCTTCTCAACTCTTCTCTCAAGCACCGCATCGCCCGTCCTAACGCGTGTCATAACTAATCTCAACATAGGAAAGTCAGATATTGGGAAACTTGTTATAGCAGCAGGGATGTATTCAGATTTTTTGTGTTCTTTTCTTCTTTCATTTGGATACAGTTCAATGCCGTTGGACACGTTTTGCGGTGGTATCGAAGACAAGGATCGGATTAAGAAGGCAGTAGCAATTTTTTTTGCGGTCGTTGTGCAGACAATGCTCACAGCCACAATTTCTCCAGTTTTTATGAATTGGGTTAACAATGAAAACCCTGAAGGGAAACCCTTAAAAGCCTCACACTTAGTACTTTCAATTGCATTCATGGTTATTAGTTGTGCTTCATCAATACTATATGATTATAGTCCAATTCTAAGTGCATTTATAACAGGAATATGTTTTCCTAGGGAAGGAAGAATTTCCAAATGGGTTATCAGAAAAATCAACTACATGTTGACAACTATATTTTTTCCATTCTTTTTCTTATGGATGGGATATGCAGCTGATTTCAGAAAGTTTGAGGTTGGACAATTAGAAACATGGTTAAAAATATTTATACCAATCATAATAGTAATGGTAGGTGAAGTTGCTGGAACATTAATTTCTGGTGTAATTCTTGGATTTCATTGGCCTGAATCAATTGCTATTGGATTGCTACTAACAACCAAGGGACATTTTCATATCTACATGGCTATCAAGATGATGAATTGCAACTCTGATACTTCCTCCGGTATTTCTTTGGTAATTGCAATATTTTTCACAGTGGTGCATGCGCCTGCAGTTGTAGCACGGATCATCAAACGTGCGCGACAAAAAGCGCCTACTCATCACATGTCACTCCAGTTACTTGATCCATCAAGTGAGCTAAGGATTTTATTGTGCCTTCATGGACTCGACAACATTTCTGGTTCCATAAACTTCATGGAGATATCAAGAGGGAAATCAGACCCTGGAATTTTGGTATATGTGACAGAAATGATTGAACTAACTGATCATATAGCAGTCACAGTAGAAAAGGGTGAAGGAGTAGAAACAACAATTGTGAAAGACAAGGACGTCATGGAGATGAGAGACCAAATAACTAGCTCGTTTCAAGCTCATATAGATGATGATGATGAAGGTGTTACGATCAAAAGAACATTGGCAGTGGCAACAATTAATAACATGGCACAAGATATCTGCACTTTGGCAGAGGATTTGATGATTGCACTCATCATACTACCATTCCATAGGATACAATGTGAAGATGGAAAATTGGATGGTGGCAATCAAGGATTTCGTTATGTAAATCGAAAGTTATTGAAGAGTGGTCCTTGTTCAGTGGGGATTCTAGTGAATAGAGGCTTAGGATCCATTGGAAAGATATCAAAGTCTCAAATATCAGTGAATGTGGCAACAGTGTTCATTGGTGGAAAAGATGATAGAGAAGCCCTTGCCTACACTGGTCGTGTATCAGGGCATCCAGGAGTTAAACTAACAGTTATAAGATTCTTAGTAGACACAAGTGTGGAATCTTCAAGAATATCAGCATACAGGGTAAGCCTTCCAGAGAAAGAAGAGGAAATGGGGTTGGATGATGAATGCTTTGCACAGTTCTATGACAAACATATTTCCAGTGGCAATGTTTCCTATTTGGAAAAACATCTTGCTAATGCAGCTGAGACTTTCTCTACTCTTAGATCATTTGAAGGACAATACTCATTAGTCATTGTAGGAAGAGAAGGTGGATTGAACTCAATATTGACAAAAGGGATGAATGACTGGCAACAGTGTCCAGAATTGGGACCAATAGGTGATGTTCTTTCAGGACCAGACTTTTCAAAAACAGTGTCTGTCTTGGTAATCCAACAACACAAACGTAAAGGAGAAATAGATGGACTTGATGAGGAATTCTCCATCATGTAG 2358 0.3846 MALALTQCSQKLGYLIFLLGKNFVMFMAMVIACNALHYLLKPYQQPRITSDILVGLIMGNAPFLRDLYGQFNGTFGFIIDFGMMCYMLAVGMEMDPYVLFKKPSRDVQVAIVGIITTFLMACFITPFLHYFTGHHLLEYTLSFSTLLSSTASPVLTRVITNLNIGKSDIGKLVIAAGMYSDFLCSFLLSFGYSSMPLDTFCGGIEDKDRIKKAVAIFFAVVVQTMLTATISPVFMNWVNNENPEGKPLKASHLVLSIAFMVISCASSILYDYSPILSAFITGICFPREGRISKWVIRKINYMLTTIFFPFFFLWMGYAADFRKFEVGQLETWLKIFIPIIIVMVGEVAGTLISGVILGFHWPESIAIGLLLTTKGHFHIYMAIKMMNCNSDTSSGISLVIAIFFTVVHAPAVVARIIKRARQKAPTHHMSLQLLDPSSELRILLCLHGLDNISGSINFMEISRGKSDPGILVYVTEMIELTDHIAVTVEKGEGVETTIVKDKDVMEMRDQITSSFQAHIDDDDEGVTIKRTLAVATINNMAQDICTLAEDLMIALIILPFHRIQCEDGKLDGGNQGFRYVNRKLLKSGPCSVGILVNRGLGSIGKISKSQISVNVATVFIGGKDDREALAYTGRVSGHPGVKLTVIRFLVDTSVESSRISAYRVSLPEKEEEMGLDDECFAQFYDKHISSGNVSYLEKHLANAAETFSTLRSFEGQYSLVIVGREGGLNSILTKGMNDWQQCPELGPIGDVLSGPDFSKTVSVLVIQQHKRKGEIDGLDEEFSIM 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03080 785 PANTHER CATION/H + ANTIPORTER 4 783 - -
Car06g03080 785 Gene3D - 21 426 IPR038770 -
Car06g03080 785 PANTHER CATION/H+ EXCHANGER 3 4 783 - -
Car06g03080 785 Pfam Sodium/hydrogen exchanger family 32 414 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03080 Car-Chr6 54804314 54808179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03080 24 785 Antiporter Super Family AT3G52080 47.490 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03080 - - gmx:100815945 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03080 06 54804314 54808179 Car05g00494 05 24412576 24417109 PCT