Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03078 ATGCAAGAAGTTCAAGAACCTCAACCCCAATCAACACTCGGTCAAGAAAATGTAGATGAAGTGGTTGATGAAAGTTCTGCAAATGGTAAAGGGGAAACACCAGAGGAATTAGTGAGTAGACCTCCAAAAGTTGATTCTGAAGTTGAGGTTCTTCATGAGAAGGTCACTAAGCAAATAGTTAAGGAAGGTCATGGCAAAAAACCTTCCAAGTATTCAACATGCTTCATCCATTATAGGGCATGGGCTGAGGGCACGGAGCACAAATTTGAAGATACATGGCAGGAGCAACGACCAAGTGAGATGATATTAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGGCATTGGGGTTACAAGCATGAAAGCTGGGGAGCGAGCCTTGCTGCGTGTGAGCTGGGAACTAGGATATGGAAAAGAAGGAAGCTTTTCTTTTCCAAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGTTTTGATGAAACAAAAGATGGAAAAGCTCGCAGTGATATGACCGTGGAGGAAAGGATTGGTACAGCCGATCGGAGAAAGATGGATGGAAATGCTCTGTTTCAAGAAAATAAACTAGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCTTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAATATAGGGATATGGCTCTGGCCGTAAAGAATCCATGCCATCTTAACACGGCAGCCTGTCTGATTAAGCTGAACCGTTATGAAGAAGCTATAGGACAATGCACCATTGTAAGTATATGA 789 0.4271 MQEVQEPQPQSTLGQENVDEVVDESSANGKGETPEELVSRPPKVDSEVEVLHEKVTKQIVKEGHGKKPSKYSTCFIHYRAWAEGTEHKFEDTWQEQRPSEMILGKEKKEMTGLGIGVTSMKAGERALLRVSWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKDGKARSDMTVEERIGTADRRKMDGNALFQENKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNTAACLIKLNRYEEAIGQCTIVSI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03078 262 MobiDBLite consensus disorder prediction 23 46 - -
Car06g03078 262 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 31 259 - -
Car06g03078 262 MobiDBLite consensus disorder prediction 1 46 - -
Car06g03078 262 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 31 259 - -
Car06g03078 262 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03078 262 Gene3D - 39 164 IPR046357 GO:0003755
Car06g03078 262 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 160 IPR001179 GO:0003755
Car06g03078 262 Gene3D Tetratricopeptide repeat domain 165 261 IPR011990 GO:0005515
Car06g03078 262 SUPERFAMILY FKBP-like 33 162 - -
Car06g03078 262 SUPERFAMILY TPR-like 174 258 IPR011990 GO:0005515
Car06g03078 262 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03078 54 260 Calmodulin-binding Proteins AT3G25230 31.905 2.36e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03078 - - gmx:100790587 457.988