Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03076 ATGAAGAGATTGAGGTCAAGCGAAGATCTTCACTCGTACAACAACGGTGAAAAGAATAATGGTGTAAAGGATTCAAATCTGAACCGTTCGTTTTCATCTTCTGGTCAGAGAAGTTTTTACTATAAACAAGAGAATGTGCGCAAGGGTTTGCTCACTTCCTCTTCATCACGCTACGAAAGGGATCGGACGGTGGAAGAAGATCGGGAGGGTTCGAGAGTCGTTCGGAAGCGATCTGAGCATGATTTCGATGGTTTTGATAGGAGGAAGGGGTTTGATCGGTATAGGGAAggtggtggttatagtggtggtggtggaggtggAGATAGGAATTCGATTCATCGGTCGGAGAGTTTCTGTGGTGGATCGAGGAGGGAGTTTCCGAAGGGATTTCGATCAGAGAGGGATCGGTCGAGAAGGGAGGGAAGTGTATCTTCGTGGAGAAGAGGTTTGAAGGATTTTGATGAGAGCAGTAGAGGGAGtaataataataacaataataGAGTTGAAGAGAGAGTTGTTCGTTCGCCCAAGGGATTTTCAAGGGATGTGAAATCGCCAACTTGGTCCAAGGATTCAGAGAGCGAACATTCGAAGAAGAGATCTCCTTCTCCGAGGGTGTTTAGAGAAGCTAAGTCTAAATCAAAGTCACCTTCTTGGTCTAAGGATTCAGAGAGTGAGCAATCCAAGAGTGTTAGTGTTGAGGTGAAGAAAACTGAAGAGTTGTTGCAACAGGTACAGTGTGGAAGTGCTAGTGAAATGGAAGAGGGGGAGCTTGAACCTGAACCCGTCTCGCATACCGATTCTGAACCGGCTCTTAAAGATGTACCAGCTGGAAGTGAAAGCCAGGAAACCTCTGAGGACAAACAAGTGCATAAGCAGAATGAGTGCCCACCCGGTGATGCAGATGTTGTTATGGAAGAAAAACAGTTGTTGTCGAGTGAGAAAGATGCGAAATCTAAGGAGGATATTGATTTGGAGGTTAAAGATGCAGAGAAAGACGTTCATGAACAGCCTCAGACTCGAGATAATCCAACTGAGAAATTGCCTGTTACAGAGACTGAGATTGGAAACGTCCGTAATGATGGTGATGATAAGAAAGATGTGTGTTTGAATGGTGAAGATACTCGCTCCGAGGATGAAGCTGAGAAGGAAACATATAAGGAGAAGGCATTGGTTAATGAAGAGGAGCATGTGGAGGACAAGGGTGTAGGTGGTGGTGACAGACCTGAGTTAAACGATGAAGGCTCAACCGAGAATGAAGTTGCCAACGAAGTGAAGGAAGAAACAGTCACTGCAAAGGATAAAGGCAAAAGCGTCTCGGTCACGCCTTCTGATGTTGCTTATTCTTCAAAAGATGGAATGTGGATTGATAGAGAGTCAAAAGATATCGTGGCATGCCCTGAAGATGCCATGGAAGGTCCGAGCACAAGAGGGTTTGAGCTTTTCTCTAGATCTCCAGTGAGAAAAGATGAAAAGTCCGAACGCACGGTCCTCAAAAAGGAGAAAGATGAAATTCTTGCAATGAGGCAGCTTGATCTTACTCTTAGCTTGCCAAATGTTCTGTTACCGATAGGAGCTCAGGAGACAATATTGCAAGCCACTCCTGGATCTCCCAGTCAAGCACGGAGTGTTCAGTCTCTAAGTAATACATTTTGTACTAACTCGGATGGTTTTACTGCATCAATGTCATTTTCAGGTTCCCAATCATTATATCACAATCCAAGTTGTTCTCTAACGAAAAATTCAGTGGACTATGAAAAATCGGTTGGCAGTCGCCCCTTGTTTCAGGGAATAGATTGGCAGGCCCTGTCTCAGGGAGATCCCAAGCAGAAAGAAGTTCCCTCTGGTCAGAGAAATTTGACAAATGGGAATGGCTCACTTTACCAGCCTCAAGCATCATGGGGCATTTTAGACACTCAAGCTGTGAAAGGTGGTCAACCTTCGAGGGCTCTAGAAGGAAGCTCGAAAATGGGCAGCGGACTTGAAAGGCAACTGAGTTTTCATAAGCAGCTTTCAGGACATTCAAGGCGACATGATGATGTTCGATCTCCTACACAAAGTGTTGGGTCTCATGACAATGGATCAAATTATAGTTTTGAGAAAAGGAAGGAGGTTAGGGAAAGGAGTAGCGGTAGTCTACATCGATCTACCAGCCAGAAGGGACAAGAACAATTTCTGATGGGTGGACTTGATTATGTTGAGACAATCATTGCAAGAGTAGTTTCTGAACCTGTGCATGCAATGTCTAGAAAGTTCCATGAAATGACCGGACAGTACATAACACGGCTGAAAGAGGGTATTCTGGAACTCATGCTCAATGCAGATAAGCATGGACAGATACTTGCTTTTCAAAAAGTTTTGCAGAACAGGTCTGATATAACCTTGGATGTTCTAGTGAAGTGTCACCGAGTGCTGCTGGAAATTTTGGTTGCATTAAAAACTGGTGTAACTCATTATCTTCACCTAGATGATAACATTTCATCTTCGGATTTAGCTCAAGTTTTTCTATACTTGAAGTGTAGGAATTTATCATGTCAAAGTCAGTTGCCTGTTGATGAATGTGATTGCAAAATTTGTGTGCAGAAGAATGGTTTTTGCAGGGAATGTATGTGTCTTGTGTGCTCTAAGTTTGACAATGCGTCGAATACGTGTAGTTGGGTTGGGTGTGATGTTTGTCTTCACTGGTGTCACACCGACTGTGGATTACGAGAATCCTATGTTAGAAATGGGATTAGTACTACTGGAACAAAAGGAATGACTGAGATGCAGTTTCACTGCATTGCTTGCGACCACCCTTCTGAGATGTTTGGCTTTGTCAAAGAGGTGTTTCAAAGTTTTGCAAAAGAGTGGTCAGCCGAAACTCTTTGCAAGGAACTTGAATATGTAAAGAGAATCTTTTCTGCCAGCAAGGATATAAGAGGTAGACAGTTGCATGAGATTGCCGATCAAATGCTGCCGAGGCTGACACATAAGTCGAACCTTCCTGAGGTTTGGAGACACATCATGTCTTTCCTTTCTGGTTGTGATTCTTCCAAATTAACCACGACAACAAACTTTTCTGGGAAGGATCAAGTCAAAGAAAACAATGGGGTGGCTGGGCCCAGCCAGGAAGCTGCTTGGCTAAAGTCTATTTATTCTGAGAAGCCGCCACTGTTAGAACGGCCTGCAAACATGCTTCCTAGCTTTGACCAGAATAATAGTAGAAGGCCCCTGGTGCAAGAGTTGCAGATTAGTAGTGTCCCAAAGGACTTCTGTTTTGATGAATTGGAGAGTATAGTAAAAATCAAACAGGCAGAGGCTAAAATGTTTCAATCTCGTGCTGATGATGCTAGGAGGGAAGCTGAAGGGTTGAAACGCATAGCCCTTGCAAAGAATGAGAAAATCGAAGAAGAGTATGCCAATCGAATTGCAAAGTTACGGTTGGCCGAGACAGATGAAATGCGTAAACAAAAGATAGAAGAACTCCAAGCATTAGAGAGGGCTCATATGGAGTATTTGAACATGAAAATGAGAATGGAGTCAGACATTAAAGATCTGTTATCCAAAATGGAAGCTACTAAAATGAGCCTTGCCATGTGA 3579 0.4297 MKRLRSSEDLHSYNNGEKNNGVKDSNLNRSFSSSGQRSFYYKQENVRKGLLTSSSSRYERDRTVEEDREGSRVVRKRSEHDFDGFDRRKGFDRYREGGGYSGGGGGGDRNSIHRSESFCGGSRREFPKGFRSERDRSRREGSVSSWRRGLKDFDESSRGSNNNNNNRVEERVVRSPKGFSRDVKSPTWSKDSESEHSKKRSPSPRVFREAKSKSKSPSWSKDSESEQSKSVSVEVKKTEELLQQVQCGSASEMEEGELEPEPVSHTDSEPALKDVPAGSESQETSEDKQVHKQNECPPGDADVVMEEKQLLSSEKDAKSKEDIDLEVKDAEKDVHEQPQTRDNPTEKLPVTETEIGNVRNDGDDKKDVCLNGEDTRSEDEAEKETYKEKALVNEEEHVEDKGVGGGDRPELNDEGSTENEVANEVKEETVTAKDKGKSVSVTPSDVAYSSKDGMWIDRESKDIVACPEDAMEGPSTRGFELFSRSPVRKDEKSERTVLKKEKDEILAMRQLDLTLSLPNVLLPIGAQETILQATPGSPSQARSVQSLSNTFCTNSDGFTASMSFSGSQSLYHNPSCSLTKNSVDYEKSVGSRPLFQGIDWQALSQGDPKQKEVPSGQRNLTNGNGSLYQPQASWGILDTQAVKGGQPSRALEGSSKMGSGLERQLSFHKQLSGHSRRHDDVRSPTQSVGSHDNGSNYSFEKRKEVRERSSGSLHRSTSQKGQEQFLMGGLDYVETIIARVVSEPVHAMSRKFHEMTGQYITRLKEGILELMLNADKHGQILAFQKVLQNRSDITLDVLVKCHRVLLEILVALKTGVTHYLHLDDNISSSDLAQVFLYLKCRNLSCQSQLPVDECDCKICVQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYVRNGISTTGTKGMTEMQFHCIACDHPSEMFGFVKEVFQSFAKEWSAETLCKELEYVKRIFSASKDIRGRQLHEIADQMLPRLTHKSNLPEVWRHIMSFLSGCDSSKLTTTTNFSGKDQVKENNGVAGPSQEAAWLKSIYSEKPPLLERPANMLPSFDQNNSRRPLVQELQISSVPKDFCFDELESIVKIKQAEAKMFQSRADDARREAEGLKRIALAKNEKIEEEYANRIAKLRLAETDEMRKQKIEELQALERAHMEYLNMKMRMESDIKDLLSKMEATKMSLAM 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 751 773 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 790 805 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 805 820 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 831 852 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 877 897 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 950 969 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1087 1107 IPR004082 -
Car06g03076 1192 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1126 1148 IPR004082 -
Car06g03076 1192 PANTHER PROTEIN OBERON 4 1 1191 - -
Car06g03076 1192 Coils Coil 1141 1175 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 608 627 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 605 627 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 118 155 - -
Car06g03076 1192 Pfam Coiled-coil region of Oberon 1060 1180 IPR032535 -
Car06g03076 1192 MobiDBLite consensus disorder prediction 280 295 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 357 434 - -
Car06g03076 1192 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1191 IPR004082 -
Car06g03076 1192 MobiDBLite consensus disorder prediction 13 53 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 1 447 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 668 722 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 696 713 - -
Car06g03076 1192 Pfam PHD - plant homeodomain finger protein 840 963 IPR032881 -
Car06g03076 1192 MobiDBLite consensus disorder prediction 307 342 - -
Car06g03076 1192 CDD PHD_OBE1_like 870 929 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 54 95 - -
Car06g03076 1192 MobiDBLite consensus disorder prediction 170 236 - -
Car06g03076 1192 Coils Coil 1093 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03076 Car-Chr6 54653796 54658971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03076 840 988 PHD Gene Family AT5G57380 26.846 2.32e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03076 - - mtr:MTR_4g039650 1782.69