Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03055 ATGAGCAAAGTAAATAGTTTTTCTTTTCTTCTATCCTTTCTCATGGTTCTTTCATACTTTGTGATTGAAATCCATGGAAACAAACAAGTAAAAGCTCTTGACAAACTTCAAAAGGAAAAATATAGAGGAAATTCACAAATTGATAGGAGTGATGAATTTGAGGTAGAAGAGGTTGTGAATTATGATGATATTGTTCATTCACAAGAGGGTCTCAAAGAGAAAGACAGGATTGTTAGGCTTCCAGGGCAGCCCTTAGTGAAATTCTCTCAATTTGGAGGGTATGTCACATTGGATAAATCAGCTGGTAGTGCTTTTTACTATTACTTTGTTGAAGCTCACAATTCTAAAGAAACACTTCCCCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTAGCTTATGGAGCAATGCAAGAATTGGGACCTTTCAGAGTAAACAGTGATGGCGAAACACTTCACCAAAATAGATACTCATGGAACTATGCTGCAAATGTTTTGTTCGTGGAGTCCCCTGTTGGAGTAGGATTCTCTTATTCAAATACATCATCAGATTATAGCAAAAATGGAGACAAGAAAACAGCTTCATATAACTATTTATTTTTGGTAAATTGGTTGGAAAGATTTCCAGAATATAAAAATAGAGATTTTTATATTTCTGGAGAAAGTTATGCTGGGCATTATGTTCCTCAACTTGCACATACCATTCTCTATCATAACAAAAAGTCAAAAAAACCAATCATCAACCTCAAAGGAATCTTGATAGGAAATGCATGCAATTCAGTAGCTGATGAAGTTGACAATGATCTTTCATACATTGATTTATACAACATTTATGCTCCACTATGCAAAAATGACTCTCTCACAACCAAGCCCAAAAAGCCCTCTATTGTAACTGATCCATGCAGTGAATCATATGTCCATGCTTATCTTAATAGAGAAGAAGTTCAAGAGGCCCTTCATGCTAATGTCACCAAGCTCAAATATGAATGGACTCCATGCAGTAGTGTCATTAGATCATGGGTTGATAGTTCTTCAACAGTCCTTCCCCTTTTACATGAATTCCTCAACAATAGCCTTAGGGTTTGGGTTTTCAGTGGTGACACAGATGGAAGAGTTCCTGTTACTTCAACTAAGAATTCACTTAAGAAGTTGAACCTTCCCATTAAAACTGTTTGGCACCCTTGGGTTGCCTATGGAGAGGTTGGTGGCTATACAGAAGTATACAAGGGAGACCTAACATTTGCTACAGTAAGATATGCAGGACATCAAGTGCCAAGTTACCAACCAGCAAGGGCTCTTTCATTGATTAAACATTTCTTAGATGGCACTCCTCTTCCTAGTCCCAAAAGTCAAGCCTAG 1365 0.3751 MSKVNSFSFLLSFLMVLSYFVIEIHGNKQVKALDKLQKEKYRGNSQIDRSDEFEVEEVVNYDDIVHSQEGLKEKDRIVRLPGQPLVKFSQFGGYVTLDKSAGSAFYYYFVEAHNSKETLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGETLHQNRYSWNYAANVLFVESPVGVGFSYSNTSSDYSKNGDKKTASYNYLFLVNWLERFPEYKNRDFYISGESYAGHYVPQLAHTILYHNKKSKKPIINLKGILIGNACNSVADEVDNDLSYIDLYNIYAPLCKNDSLTTKPKKPSIVTDPCSESYVHAYLNREEVQEALHANVTKLKYEWTPCSSVIRSWVDSSSTVLPLLHEFLNNSLRVWVFSGDTDGRVPVTSTKNSLKKLNLPIKTVWHPWVAYGEVGGYTEVYKGDLTFATVRYAGHQVPSYQPARALSLIKHFLDGTPLPSPKSQA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03055 454 Gene3D alpha/beta hydrolase 70 273 IPR029058 -
Car06g03055 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 260 448 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 261 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 Gene3D - 349 444 - -
Car06g03055 454 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Car06g03055 454 Pfam Serine carboxypeptidase 82 270 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 Pfam Serine carboxypeptidase 271 444 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 414 427 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Car06g03055 454 SUPERFAMILY alpha/beta-Hydrolases 68 449 IPR029058 -
Car06g03055 454 Gene3D - 303 339 - -
Car06g03055 454 PANTHER CARBOXYPEPTIDASE 260 448 - -
Car06g03055 454 PANTHER CARBOXYPEPTIDASE 10 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03055 Car-Chr6 53286709 53292334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03055 311 447 Calmodulin-binding Proteins AT2G22960 31.387 1.30e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03055 K16297 - gmx:100783864 694.886