Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03037 ATGGAGTCCTTCTTCTACACTCTTCATGTAAGTCCTGTTCATGATTCAATTCATACTATGTTTCAACACATTCCTTATGTGAACAATAGCTTCCACATTAATCTTGATTACACCAACACGATTATAGAACCCTATGCAAGAAACACTGCCTCTCTGTCCATAATTACAATCAAGGACACATTTGTTGTTCCTCTAGAAATTGTATGTAATTGTTTGGAAAGGGATCTTAACATTGCTTTATACCACATCTTTTCGTTTTTGCCTTCTTACATATTAGATTCAATTATACCTAAAGTTGAACAATATGCTAGACAAATGGTTGCGAACAACAATGTATTGGAGATGAATTTGTCGCTTCGCGTTACCACGGGAAAATGGGCAGAGAAAATTGAGGATTTGTTGGAGATATTAGAAATTAATCATCCCTGTTATGACTCTAAAGAAAAATGTTCAATTTGTTTGGAGGAATTTTGCACTAGTTCAAAGTCAGAAATTGTTCACACCAAATGTTCACATTTTTTCCATAAAGATTGTATTGTGCCGTGGATTCAAAGTTGCGTCAATTCTTCTTCTTCTTGCTCTTGTCCGTTGTGTCGAGGTCAAATATTATAA 612 0.348 MESFFYTLHVSPVHDSIHTMFQHIPYVNNSFHINLDYTNTIIEPYARNTASLSIITIKDTFVVPLEIVCNCLERDLNIALYHIFSFLPSYILDSIIPKVEQYARQMVANNNVLEMNLSLRVTTGKWAEKIEDLLEILEINHPCYDSKEKCSICLEEFCTSSKSEIVHTKCSHFFHKDCIVPWIQSCVNSSSSCSCPLCRGQIL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03037 203 ProSiteProfiles Zinc finger RING-type profile. 150 199 IPR001841 -
Car06g03037 203 Pfam Ring finger domain 149 199 IPR001841 -
Car06g03037 203 SUPERFAMILY RING/U-box 149 202 - -
Car06g03037 203 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 100 199 - -
Car06g03037 203 SMART ring_2 150 198 IPR001841 -
Car06g03037 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 203 IPR013083 -
Car06g03037 203 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 100 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03037 Car-Chr6 52728118 52728729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03037 145 203 C3H Transcription Factor Family AT3G58720 38.983 6.57e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03037 - K16282 cam:105851367 242.662