Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03026 ATGGCCAAAAAGAAGAGCTGGTTTAATCTTGTGAAGAAATTTTTCATATGGGACACACATTCCACACAAGAGAAGAAGAAGGAGAAAAGAAGGAAATTGATATTTGGAAGACTAAAGAGCAAGAAGTTACATTCAATTACAGCTCCACCAAAGTCGCAAAATGAAGCAGAGGAGGGACAAAGTAAGCATGGTTTGACAGTAGCTATTGCTTCAGCTTCTGCTGATGAAGTTGTTATGCTTCAATATGAAGATAACTCAGAAGAATCTCAACCTGTCAAAACTAGGAATTGTGTTCATCAATTAATATATGAGTGCCAGAGGGAGATTCAAGAATTTGCAGCCATCAAAATTCAAACTGCCTTTAGGGGTTACCTTGCAAGGATTGCTTTGAGGGCATTGAAGGGAATTGTGAAACTTCAAGCTATCATTCGTGGGAGAGCAGTGAGACGCCAAGCTATGAATACTCTCAAGAGCTTGCAGTCCATTGTAAATATACAATCAAAGGTATGTGCAAGGAGACTTCAAATGGTTGAAGGAAGATGGGATTGTGTTGAAGATGAAGAGATGCAATTTTCTAAAGATAAGATAATTAGGATGGACTCAAACAGTGAAAGAAAGTGGGATGACAGCACTTTATTGAAGGAAGAGGTAGATGCATTTTGCATGATCAAGAAAGAAGCAATTCTTAAGAGAGAAAGAATAAAAGAATACACCTTTAATCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAAGTGAATGGAAGATGGAGATACTGGCTAGAGCAATGGGTAGATACACAACTTTCAAAAAGCAAAGAACTTGAAGATCTAGACTCAGTTTTCAGCTCACATTCAAGAGCTGATGAACAATTTGCAATAAGACAACTTAAACCAAGAACTACTCAAAGACCAACTTCACTTGAAGGATTGGATTCTCCAGTAACAAAATACTCTCCTCACAGGAGACAGTGTTCAATAGGAGAAGACAGATCATTTTCAAGCTCTCCTGTTACTCCCGCATACATGGCTgcaactgaatcagcaagagcaaaagcaagatcaacaagctcaccaaaagcaagaacaTGGAATTATGACATGAATTCTGATACCTATTCACCTTGCAAGAAAAAGTTATCATTTGTGTCATCTGTTAACAGTGAAGTGCTTAATATTGGTGGTAGAATGGGTAAGCTTAGTTCTGGTGGTGGTAATTACCAACAAAGATCTCCAAGTTTTAAGGGTATTTCAGTGCCTATTAAATCAAGTAGGAGTATTAAGGATCTTAGTATTAATTCAGATTGTTCACTCCCTAATTGGGATGGACAAGGTTCGTTCAAATGA 1344 0.3609 MAKKKSWFNLVKKFFIWDTHSTQEKKKEKRRKLIFGRLKSKKLHSITAPPKSQNEAEEGQSKHGLTVAIASASADEVVMLQYEDNSEESQPVKTRNCVHQLIYECQREIQEFAAIKIQTAFRGYLARIALRALKGIVKLQAIIRGRAVRRQAMNTLKSLQSIVNIQSKVCARRLQMVEGRWDCVEDEEMQFSKDKIIRMDSNSERKWDDSTLLKEEVDAFCMIKKEAILKRERIKEYTFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRADEQFAIRQLKPRTTQRPTSLEGLDSPVTKYSPHRRQCSIGEDRSFSSSPVTPAYMAATESARAKARSTSSPKARTWNYDMNSDTYSPCKKKLSFVSSVNSEVLNIGGRMGKLSSGGGNYQQRSPSFKGISVPIKSSRSIKDLSINSDCSLPNWDGQGSFK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03026 447 PANTHER IQ-DOMAIN 11 5 433 - -
Car06g03026 447 Gene3D - 108 161 - -
Car06g03026 447 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Car06g03026 447 Pfam IQ calmodulin-binding motif 113 129 IPR000048 GO:0005515
Car06g03026 447 Pfam Protein of unknown function (DUF4005) 319 396 IPR025064 -
Car06g03026 447 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Car06g03026 447 MobiDBLite consensus disorder prediction 300 321 - -
Car06g03026 447 PANTHER IQ-DOMAIN 5-RELATED 5 433 - -
Car06g03026 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 153 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03026 Car-Chr6 52190174 52193502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03026 1 447 IQD Protein Family AT5G13460 46.767 2.35e-114 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03026 - - gmx:100800192 637.876