Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03025 ATGGATGCCACAAAGGATCATCAAAATATTCTTACCTTAGATGTCCATGCTGCCAAAGATCTGCTCGATTCATCTGGTTACCATTATCTTGATGTGAGGTCAGTGGAGGAATTCAAGAAAAGCCATGTTGAGAATGCTATTAATGTCCCTTATATGTTCATCACAGAAGCAGGACGGGTCCAAAATCCTGATTTTGTTAAACAAGTGGCAGAAATATATAAGAGTGAGGATCACTTAATTGTGGCTTGCAATAGTGGAGGAAGATCTAGTCGAGCCTGCGTTGATCTGCTTAATTCAGGATATGAACATATTATTAATATGGGTGGAGGCTACTCTGGCTGGGTGGACGCTGGATTTGCAGGTAACATACCTGCAGAAGAGCTCAAAACAAGTTGCAAGTTCCGTCCATAA 411 0.4136 MDATKDHQNILTLDVHAAKDLLDSSGYHYLDVRSVEEFKKSHVENAINVPYMFITEAGRVQNPDFVKQVAEIYKSEDHLIVACNSGGRSSRACVDLLNSGYEHIINMGGGYSGWVDAGFAGNIPAEELKTSCKFRP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03025 136 Gene3D - 2 121 IPR036873 -
Car06g03025 136 CDD RHOD 18 115 - -
Car06g03025 136 Pfam Rhodanese-like domain 17 116 IPR001763 -
Car06g03025 136 PANTHER THIOSULFATE SULFURTRANSFERASE 18 5 134 IPR044684 GO:0003824
Car06g03025 136 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 9 119 IPR036873 -
Car06g03025 136 ProSiteProfiles Rhodanese domain profile. 23 123 IPR001763 -
Car06g03025 136 SMART rhod_4 13 120 IPR001763 -
Car06g03025 136 PANTHER PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED 5 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03025 Car-Chr6 52129541 52139457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03025 1 127 Sulfurtransferasese or Rhodanese AT5G66170 41.085 6.74e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03025 K22547 - gmx:100794624 232.261