Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02995 ATGGGTTCTTCTAATAATGGTGGTGTGCCACCAGGATTTAGATTTCATCCAACTGATGAAGAGTTACTTCATTACTACTTGAAGAAGAAGGTTTCCTTTCAGAAATTTGATATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAACCTTGGGACTTGCAAGAAAAATGTAAGATTGGGTCAACTCCACAAAACGAGTGGTACTTCTTCAGTCACAAAGACAGAAAGTACCCTACAGGTTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCCACAGGAAGAGATAAATGCATTAGGAATACATACAAGAAGATTGGAATGAGAAAGACACTTGTGTTCTACAAAGGCAGAGCACCTCATGGACAAAAGACTGATTGGATTATGCATGAATATCGCCTTGAAGATGCCAATGATCCTACCAATGAAGAAGGATGGGTGGTGTGCAGGGTGTTCAAGAAGAAGAACTTATTCAAGATTGGGAGTGAAGGTGTATCTACACACAATCACCAAGAACAACAACAGATGAACATTAACATTTCCTCAGGAACCAATCCTCGTTCCTTCATGCATAGAGAAAACCAGTACTTACTACATCACCAACAACAGCAAAATCACTCAGCTGGGTTTGAGCATGAAAAACCTGAACTTAGTCTTCACTATCAACACTTGCAACAAAACTCTCAATACTCATCACTTTTTCAATCCCAATCTCTTCTTCATGCCCAAAAACCTCTAGAGGTTAATTTTGACTACTCATATGCATCATCATCTTTACATTCAGAACAACCAATCACAGTCAAACAACTGATGACAAATCCTAGAGACTGTGAAAGTGGGAGTGATGGATTGAGATACCAAGTTTCAGAATCTGGCATTGAAGTTGGATCATGTGAACCACCAAGGAGTGGTGGtgatggaatgaatgaatggggtatgcttgatagattggtgaatgaagattcaaCAAAATTAGGGGGAAGTAGGTTTGAAGATGCAAATAATCATCAAATCAACCAACTTTCTTTGCGAGGTGAGATGGATATTTGGGGCTATGGAAAACAATGA 1077 0.376 MGSSNNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDANDPTNEEGWVVCRVFKKKNLFKIGSEGVSTHNHQEQQQMNINISSGTNPRSFMHRENQYLLHHQQQQNHSAGFEHEKPELSLHYQHLQQNSQYSSLFQSQSLLHAQKPLEVNFDYSYASSSLHSEQPITVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPRSGGDGMNEWGMLDRLVNEDSTKLGGSRFEDANNHQINQLSLRGEMDIWGYGKQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02995 358 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Car06g02995 358 ProSiteProfiles NAC domain profile. 9 157 IPR003441 GO:0003677|GO:0006355
Car06g02995 358 SUPERFAMILY NAC domain 8 157 IPR036093 GO:0003677|GO:0006355
Car06g02995 358 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Car06g02995 358 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 245 - -
Car06g02995 358 PANTHER PROTEIN BEARSKIN2-LIKE 5 245 IPR033519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02995 Car-Chr6 51185514 51189786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02995 3 354 NAC Transcription Factor Family AT1G33280 53.994 5.69e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g02995 NAM 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02995 - - gmx:100804181 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02995 06 51185514 51189786 Car06g02995 06 51185514 51189786 ECH