Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02985 ATGGCTAATAAGTGTGTCAACAATTTCTTTCAATTTTTCAAGTTGTTGGAAATTATGTTACTCACTTCATACTATGTTATTTATTTCCCTCCTTGTGTGTCTCAAACAATTGAAAAACAAGCCCTTCTTGATTTCAAGAACCATTTGAAGGACTCATTGAATACTTTATCTTCATGGAATGAATCAAACTACTCTCCATGTAATGGTTTTCATGGAATCACATGTGACTCATTTTCTGGAAAAGTAACAGAAATCACACTTGATAATAAGTCCCTCTCGGGCGAAATTTTTCGATCAATATCAGTTCTTCATAGCCTGCAAGTTCTGTCATTACCATCAAATTCTATTTCTGGAAATCTTCCATCAGATATAAGTAAACTCACAAACCTCAAAGTCTTGAATCTATCGGTAAATGAGCTGGCTGGAAGAATTCCGGACCTGTCTCGACTGAGAAACCTTCGAATTCTTGATCTCTCGGCGAACTATTTTTCAGGTAATGTCCCGAGTTGGATAGGGAATCTCAGTGGACTAGTTTCACTCGGTCTCGGTGTGAACGAGTACAATGAGAGTGTGATTCCAAAAAGTATTGGAAATTTGAGGAACTTGACTTGGCTTTATCTTGGTGGTTCTAATTTGATAGGAGAGATTCCAGAATCAATATACGAAATGAAAGAATTGAAGACACTTGATATTTCAAGGAACAAGTTAAGTGGCAAAATCTCAAGATCGATTTCGAAGCTGCAAAATGTTTACAAGATCGAGCTGTTTTCGAATAATTTGACAGGTGAAATACCTGTTGAGCTTGCAAATCTTACTAACTTGAGAGAGATTGATCTTTCTGCAAACAACTTGTATGGTAAGTTGCCTAATGAAATTGGTGATATGAAAAATTTGGTTGTTTTTCAATTGTATGATAATAAATTTTCTGGTGAAATTCCTGTTGGATTTGGTGAAATGCAAAATCTCGAAGGATTTTCGGTTTACAGAAACAGATTCACGGGGATTATTCCTGAGAATTTCGGCCGATTTTCTCCGCTTAAAAGTATCGACATATCCGAGAATCAGTTTTCGGGCGGTTTCCCAAAGTACTTGTGTGAGAAAAAAAAGTTGAGAAACTTGCTTGCATTGCAAAACAACTTTTCTGGTAATTTTCCTGAGACTTATGTTCCATGCAAGTCACTAGAAAGATTTAGGATCAGTAACAACTTTTTAAATGGAAAAATTCCAGAAGGTATATGGTCACTACCTTATGCAAAAATAATTGATTTTGGTTTCAATGATTTCAGTGGTGAAGTATCTTCACAAATTGGTTATTCAACTAGTTTAAGTGAGATAGTTTTGATGAATAACAGGTTTTCTGGTAATCTTCCATCAGAAATTGGAAAGTTGGTGAATTTGGAGAAACTTTACTTGAGCAAGAATAATTTCTGTGGTGAAATACCATATGAAATTGGTTATTTAAAACAGTTATCCACTTTGCATTTAGAAGAGAATTCATTAACTGGTTTAATACCAAAGGAGCTAGGTGATTGTTCAAGGCTTGTTGATTTGAATCTTGCTTGGAATTTTTTATATGGAAATATTCCTAAGTCAGTTTCATTTATGAGTTCATTGAACTCTATTAATGTATCTAGAAACAAACTTACAGGCTCTATTCCTGATGATTTGGAGAAAATGAAATTAAGCTCAGTTGATTTTTCAGAAAATATGCTTTCTGGTGGAATTCCTTCTGGTCTTTTTGTTATTGGTGGAGAAAAGGGTTTTATAGGAAACAAAGGATTATGTGTTGAGAAAAATTCAAAAGCTTCTTCACTGAATTATTCTTATTTGAAGATTTGTGATACAAATTATGATGGTGTGACAAAAAGGGTCTTTGGATATAAATTTGTATTGCTCATTTTCATTGCTACTATTGTAGTTTTAGTTGTTTTGTTTCTTTTGAGTTGTAGAAGAAATGGAAAAGAAAAGAATTTAGGAGTTGAAAAGGAAGTAAATGAAAAATGGAAACTAGCAGCATTTTTCAACCAACAAGTAGTAGAAATTGATGCTGATGAAATAAGAAGCAATTTAGGTGAAGATAATTTAATAGGCTATGGTGGTACCGGAAAGGTTTATCGAGTCGAGTTGAAGCGAACCGGCACCGTGGTGGCCGTAAAGAAGCTAGAGAAAGTAGCTTCTTGTGTGAAAGTTTTAGGTGGTGCTGAGACAGAGATTTTGGGAAAAATTAGACATAGAAATATAGTTAAACTTTATGCTTGTTTAATTAAAGGAGGATCAAAACTTTTAGTGTTTGAGTATATGTCAAATGGTAATCTTTTTCAAGCTCTTCATAGAGGAATAAAAGATGGAGGGAAAGTAGCATTGGATTGGAATCAAAGGTATAAAATTGCTTTGGGAGGTGCAAAAGGAATTTGCTATTTACACCATGATTGTTCTCCCCCTGTTATTCATAGAGATATTAAATCAAGCAACATTTTGCTTGATGGAGATTATGAGGCAAAAATTGGTGATTTTGGTGTTGCAAGGTTTGCAGACAAATCTCAGATTAATGGTTATAGCTTTTTAGCTGGCACACATGGTTATATTGCTCCAGAATTGGCTTATACAACTGAAATAACCGAAAAAAGTGATGTGTATAGCTTTGGAGTGGTGCTATTAGAGTTAGTAACCGGAAGAGAAGCTGTTGAAGAAGAATATGGAGAAGCAAAGGACATTGTTTATTGGGTTATGACTAATCTCAATGACCGTCAAACTGTACTCAACAATATTCTTGATCATAGAGTTTCATCAATGTGTTTAATTGAAGATATGATCAAAGTCTTGAAGATTGCTATTAAGTGCACAACTAAGCTTCCAACTTTGCGACCTACAATGAGAGATGTTGTTAAAATGCTCATTGATTCTGAACCTTGCAAGATGAAATCTCAAGGATGTAGTTATCTTGAGAAAGATTCGGTGTGTTTTCTCTAG 2970 0.3444 MANKCVNNFFQFFKLLEIMLLTSYYVIYFPPCVSQTIEKQALLDFKNHLKDSLNTLSSWNESNYSPCNGFHGITCDSFSGKVTEITLDNKSLSGEIFRSISVLHSLQVLSLPSNSISGNLPSDISKLTNLKVLNLSVNELAGRIPDLSRLRNLRILDLSANYFSGNVPSWIGNLSGLVSLGLGVNEYNESVIPKSIGNLRNLTWLYLGGSNLIGEIPESIYEMKELKTLDISRNKLSGKISRSISKLQNVYKIELFSNNLTGEIPVELANLTNLREIDLSANNLYGKLPNEIGDMKNLVVFQLYDNKFSGEIPVGFGEMQNLEGFSVYRNRFTGIIPENFGRFSPLKSIDISENQFSGGFPKYLCEKKKLRNLLALQNNFSGNFPETYVPCKSLERFRISNNFLNGKIPEGIWSLPYAKIIDFGFNDFSGEVSSQIGYSTSLSEIVLMNNRFSGNLPSEIGKLVNLEKLYLSKNNFCGEIPYEIGYLKQLSTLHLEENSLTGLIPKELGDCSRLVDLNLAWNFLYGNIPKSVSFMSSLNSINVSRNKLTGSIPDDLEKMKLSSVDFSENMLSGGIPSGLFVIGGEKGFIGNKGLCVEKNSKASSLNYSYLKICDTNYDGVTKRVFGYKFVLLIFIATIVVLVVLFLLSCRRNGKEKNLGVEKEVNEKWKLAAFFNQQVVEIDADEIRSNLGEDNLIGYGGTGKVYRVELKRTGTVVAVKKLEKVASCVKVLGGAETEILGKIRHRNIVKLYACLIKGGSKLLVFEYMSNGNLFQALHRGIKDGGKVALDWNQRYKIALGGAKGICYLHHDCSPPVIHRDIKSSNILLDGDYEAKIGDFGVARFADKSQINGYSFLAGTHGYIAPELAYTTEITEKSDVYSFGVVLLELVTGREAVEEEYGEAKDIVYWVMTNLNDRQTVLNNILDHRVSSMCLIEDMIKVLKIAIKCTTKLPTLRPTMRDVVKMLIDSEPCKMKSQGCSYLEKDSVCFL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02985 989 SUPERFAMILY RNI-like 320 580 - -
Car06g02985 989 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 18 978 - -
Car06g02985 989 ProSiteProfiles Protein kinase domain profile. 690 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02985 989 ProSitePatterns Protein kinases ATP-binding region signature. 696 720 IPR017441 GO:0005524
Car06g02985 989 ProSiteProfiles Leucine-rich repeat profile. 129 151 IPR001611 GO:0005515
Car06g02985 989 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Car06g02985 989 SUPERFAMILY L domain-like 51 405 - -
Car06g02985 989 SUPERFAMILY Protein kinase-like (PK-like) 685 965 IPR011009 -
Car06g02985 989 Pfam Leucine Rich Repeat 226 247 IPR001611 GO:0005515
Car06g02985 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Car06g02985 989 Pfam Leucine rich repeat 151 212 IPR001611 GO:0005515
Car06g02985 989 Gene3D Phosphorylase Kinase; domain 1 655 766 - -
Car06g02985 989 Pfam Protein kinase domain 693 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02985 989 Gene3D Ribonuclease Inhibitor 35 189 IPR032675 -
Car06g02985 989 SMART serkin_6 690 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02985 989 Gene3D Ribonuclease Inhibitor 190 247 IPR032675 -
Car06g02985 989 Gene3D Ribonuclease Inhibitor 248 320 IPR032675 -
Car06g02985 989 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 978 - -
Car06g02985 989 SMART LRR_typ_2 103 127 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 463 485 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 487 510 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 535 559 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 150 174 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 271 295 IPR003591 -
Car06g02985 989 SMART LRR_typ_2 199 223 IPR003591 -
Car06g02985 989 Gene3D Ribonuclease Inhibitor 321 606 IPR032675 -
Car06g02985 989 PRINTS Leucine-rich repeat signature 226 239 - -
Car06g02985 989 PRINTS Leucine-rich repeat signature 271 284 - -
Car06g02985 989 Gene3D Transferase(Phosphotransferase) domain 1 767 980 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02985 Car-Chr6 50706124 50711131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02985 22 979 Receptor kinase-like Gene Family AT1G72180 54.959 0.0 988
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car06g02985 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02985 - - cam:101508379 1959.11