Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02984 ATGGTTTGTTGGAGATTCTCCAATGCTTCTACTACTAAATATAAAAGAATCTACCATGGACCCTTTATTCAAGATATTGATAGTGGAAATTCCCATGTTTGTGGTCTTGTTAAAAGGAACAATGGTTTTCACCTTGAGTGTTGGCAATGGAATGGATTCATCAATTCAAGCATGAACATGAACATGAACATGTTAAGTATTGCTGTGGGAGAGAATTTTGTATGTGGGATATTAGAAAAAGGGAATGTTACTTGCATAGGAAGTAACAATAGAGTTGTTGGGAATGAACCTAAGAGTGGTCGAAATTATTCTGTAATTGAAGCTGGTTCAAGCCATGTTTGTGCTATCTCAATTGATGGTAGTTTGGATTGTTGGGGTGATATGGTTGGTGAGAAACCAAAAGGGAGATTCATTGGTTTGGCTTTGGGAGATAATAGAAGTTGTGCACTTGGTGATGAAATTTTGAAGTCAAATAATGCCCTCAAGGTGTTTGATAATGTTCTCCCTGGACCTTGTAAAAATGAATGTCCATGTGGTCCTTTATCAGATTCTGCTAAACTTTGTGTCTCACCAGCCATCATTTGCAAGCCTTGTTTACCATCACTTGAATTTCCATCAAACCCGTCTTCCTCTCCGATACCCAAAACTTCATCGAAAAGTGGTACTTGGAGCAACAAAATGGTGGCATTTTTAGTAATTGGGTGTGTTGGTTGTAGTTCATTGTTACTAGTCTTGTCTTTCTTCCTTTACAAATACTGCAAAAGCACAGTATGCAGAGTCCATGACTCCGGCAGATTAGACGATCCCGAAATCCAAACGGAACCTCAAGGACCTATCCCTAATGCAACTCTTGAGAAGAGGTTAAGCCATGTAATCAGCATGGGAAATGGAGGCACACATTTGGAGGAATATTCACTTCAAACACTAATTGAAGCCACCAACGATTTCTCTCAAGAGAACAAAATTGGTGTTGGAAGTTTTGGTTCAGTGTACCATGCAAAACTTGAAGATGGAAAAGAAGTTGCTATAAAAAGAGCTGAAATGTCATCAACTTCAGCTTCTTGTGCAGTCTTAGGTGTCACAAAAAGACAAGAAGACAAAGACAGTGCATTCATAAATGAACTTGAATCTTTATCAAGACTCCACCACAAAAACTTAGTCAAATTACTTGGTTTTTATGAAGACAAAAATGAAAGAATTTTAGTATATGAATACATGAACAATGGAAGCTTAAATGATCATCTTCACAAGCTTCAAACTTCATCATCAACAAATCTTATGTCATCATGGAGTGGTCGTATAAAAGTAGCATTAGATGCAGCTAGAGGTATAGAATATTTACACCAATATGTCACACCATCAATAATCCATCGTGACATTAAATCATCAAACATATTATTAGATTCAAAATGGGTTGCTAAAGTATCTGATTTTGGTTTATCATTAATGGGTCCTAATGAAGATGAAGAGTCACATCTTTCATTACTAGCAGCTGGAACTGTTGGTTACATGGACCCTGAATACTATAGGCTACAACATTTAACAACAAAAAGTGATGTGTATAGTTTTGGTGTTGTTTTGTTAGAAATTTTAAGTGGGTATAAAGCTATACATAAAAATGAAAATGGGGTGCCAAGAAATGTGGTTGATTTTGTGGTACCATTTATTGTTCAAGATGAAATTCATAGAGTTTTAGATCCAAAAATGCCACCACCAACACCATTTGAAATTGAAGGTGTGGCTTTTGTAGGTTATTTGGCTTGTGATTGTGTTCGTTTAGAGGGTAGAGATAGACCAAATATGAGTCATGTTGTGAATAGTTTGGAAACAGCTCTTGCGGCGTGTTTGGCACAACCAATTGTACTTTCTAGATCTACTACTATCACTGTTTCTTCTGACTAG 1902 0.367 MVCWRFSNASTTKYKRIYHGPFIQDIDSGNSHVCGLVKRNNGFHLECWQWNGFINSSMNMNMNMLSIAVGENFVCGILEKGNVTCIGSNNRVVGNEPKSGRNYSVIEAGSSHVCAISIDGSLDCWGDMVGEKPKGRFIGLALGDNRSCALGDEILKSNNALKVFDNVLPGPCKNECPCGPLSDSAKLCVSPAIICKPCLPSLEFPSNPSSSPIPKTSSKSGTWSNKMVAFLVIGCVGCSSLLLVLSFFLYKYCKSTVCRVHDSGRLDDPEIQTEPQGPIPNATLEKRLSHVISMGNGGTHLEEYSLQTLIEATNDFSQENKIGVGSFGSVYHAKLEDGKEVAIKRAEMSSTSASCAVLGVTKRQEDKDSAFINELESLSRLHHKNLVKLLGFYEDKNERILVYEYMNNGSLNDHLHKLQTSSSTNLMSSWSGRIKVALDAARGIEYLHQYVTPSIIHRDIKSSNILLDSKWVAKVSDFGLSLMGPNEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLEILSGYKAIHKNENGVPRNVVDFVVPFIVQDEIHRVLDPKMPPPTPFEIEGVAFVGYLACDCVRLEGRDRPNMSHVVNSLETALAACLAQPIVLSRSTTITVSSD 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02984 633 ProSiteProfiles Protein kinase domain profile. 316 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02984 633 SUPERFAMILY Protein kinase-like (PK-like) 297 609 IPR011009 -
Car06g02984 633 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 160 619 IPR044815 GO:0004674
Car06g02984 633 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1 152 IPR044815 GO:0004674
Car06g02984 633 CDD STKc_IRAK 322 609 - -
Car06g02984 633 SUPERFAMILY RCC1/BLIP-II 4 171 IPR009091 -
Car06g02984 633 PANTHER OJ000114_01.11 PROTEIN 160 619 - -
Car06g02984 633 PANTHER OJ000114_01.11 PROTEIN 1 152 - -
Car06g02984 633 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Car06g02984 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Car06g02984 633 SMART serkin_6 316 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02984 633 Gene3D Phosphorylase Kinase; domain 1 281 405 - -
Car06g02984 633 Gene3D - 6 167 IPR009091 -
Car06g02984 633 Pfam Protein kinase domain 317 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02984 633 Gene3D Transferase(Phosphotransferase) domain 1 406 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02984 Car-Chr6 50680484 50682532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02984 1 627 Receptor kinase-like Gene Family AT5G47850 47.529 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Car06g02984 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02984 - - gmx:100305418 718.768